Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02153 ATGGAGGTAGAGGAGGTGAATGAAGGAAGTGTAAGGAAGCGAGAAGATGGAGTAGAGATAAGCAGCACTGAGAATTCCGGGCCCGCAGGATCGAAATCTTATGATGATTTTGATGGAGATGATGGAGACGAAGAAGATGGATATGGAGACAACAAGAAAAAGAACAAGAAAAGGAAGAAGTATCACAGGCACACTACTGAGCAAATCAGAGAAATGGAAGCGCTCTTTAAGGAGTCACCCCATCCAGATGAGAAGCAAAGGCAACAGCTTAGCAAGCGATTGGGGCTTCATCCACGACAAGTCAAGTTTTGGTTTCAAAATCGTCGAACTCAAATCAAGGCTATTCAAGAGCGTCATGAAAATTCCTTGTTAAAATCAGAATTAGATAGACTTCGAGAGGAAAATAGGACAATGAGGGCAACCATGAACAAGGGTTGTTGCCCCAACTGTGGGACAGAAACCAGTGGCAGAGACATTGCTATGAGGACAGATGAGCAGAAACTTCTCATTGAAAATGCCAAACTTAAAGCTGAGGTAGAGAGACTCCGAGCAGCTCTATTAAAGTATCCCCAAGCAACTGCATCACCTTCATGCTCTTCTGGAAATGACCAAGAGAATAAAAGCTCCTTGGATTTTTACAATGGAATTTTTGGACTGGAGAAGACAAAGATAATAGAGCTAGCTAACCAAGCGGTGGAGGAGCTCGTAAAGATGGCTACTGTTGCGGAACCATTGTGGGTTCGAAGTGTTGAAACTGGCCGTGAAATACTGAACTATGATGAGTACAGGAAAGAGTTCACCATTGCTGAGAATTCAAGCAAACCAAGACCAAAGACATCAATTGAGGCATCGAGAGAGACAGGAGTTGTTCTAGTGGATCTTCCGCGACTTGTCCAATGTTTCATGGACGTGGATCAATGGAAGGAAATGTTTCCATGCTTGATCTCAAAGGCAGCCACTGTTGATGTCATCTGTAAGGGTGAAGAAGCTGATAGAAATGGTGCAGTGCAACTGATGTCTGCTGAGCTGCAAATGCTTACACCAATGGTGCCCACCAGAGAAGTGTATTTTGTCCGATACTGCAAGCAATTGAATGCTCAACAGTGGGCAATTGTTGATGTTTCCATCGATAAAGTTGAAGACAATATGAATGCATCCCCCGTGAAATGCAGGAAACGCCCATCTGGTTGCATTATTGAGGACAAGTCAAATAGCCATTGTAAGGTGACATGGGTGGAGCACCAAGAATGCCAGAAAAGCACGAATCAGGCCATGTATCGTACTATAATTAACAACGGTTTGGCATTTGGAGCAGGACATTGGATGGCTACACTGCAACTTCAATGTGAACGTCAAGTGTTCTTCATGGCGACAAATGTTCCTATGAAGGATTCAACTGGTGTTGATACACTGGCTGGAAGGAAAAGTTTATTGAAGTTGGCACAAAGGATGACATGGGGTTTCTGCCGTGCAATTGGTGCATCAAGCTGTCACAATTGGGCAAAGGTAGCTGGTAAAACGGGGGAAGACATAAGGATATCGTCTAGAAAGAACTTGAACGACCCTGGAGAACCTACTGGGGTAATACTATGTGCAGTTTCTTCAGTATGGTTGCCTGTGGCTCCTCATGTTTTATTTGATTTCTTGAGAGATGAAGCTCACAGGAATGAGTGGGATATCATGTTAAGTGGAGGAAAAGTTAAATCTATTGCAAACTTAGCCAAAGGACAAGATAGAGGCAATGCAGTTACCATTCAGTCGACACAATTAAAAGAATCAAGAATATGGATCCTGCAAGACAGCAGCACAAATGGTTACGAATCCATGGTAGTTTACGCACCAGTGGACATTAATGGTACGAAGTCAGTGATGACAGGATGCAATTCCAGCGACATAGCGATATTACCTTCAGGATTCTCAATTCTTCCTGATGGAGTCGAGTCAAGGCCATTGTTGATTACATCGAGACAAGAGGAGAAGAGCACGGAAGGAGGGTCTTTGCTCACATTGGCAATCCAGCTCCCAACCAATTCATCTCCATCAGCCAAGTTAACAAAGGAATCCGTGGAGTCTGTCAAGACTCTAATATCTTCTATACTGAAAAACATAAAGACGTACTTACAATGTGAGGATAACTAA 2139 0.4338 MEVEEVNEGSVRKREDGVEISSTENSGPAGSKSYDDFDGDDGDEEDGYGDNKKKNKKRKKYHRHTTEQIREMEALFKESPHPDEKQRQQLSKRLGLHPRQVKFWFQNRRTQIKAIQERHENSLLKSELDRLREENRTMRATMNKGCCPNCGTETSGRDIAMRTDEQKLLIENAKLKAEVERLRAALLKYPQATASPSCSSGNDQENKSSLDFYNGIFGLEKTKIIELANQAVEELVKMATVAEPLWVRSVETGREILNYDEYRKEFTIAENSSKPRPKTSIEASRETGVVLVDLPRLVQCFMDVDQWKEMFPCLISKAATVDVICKGEEADRNGAVQLMSAELQMLTPMVPTREVYFVRYCKQLNAQQWAIVDVSIDKVEDNMNASPVKCRKRPSGCIIEDKSNSHCKVTWVEHQECQKSTNQAMYRTIINNGLAFGAGHWMATLQLQCERQVFFMATNVPMKDSTGVDTLAGRKSLLKLAQRMTWGFCRAIGASSCHNWAKVAGKTGEDIRISSRKNLNDPGEPTGVILCAVSSVWLPVAPHVLFDFLRDEAHRNEWDIMLSGGKVKSIANLAKGQDRGNAVTIQSTQLKESRIWILQDSSTNGYESMVVYAPVDINGTKSVMTGCNSSDIAILPSGFSILPDGVESRPLLITSRQEEKSTEGGSLLTLAIQLPTNSSPSAKLTKESVESVKTLISSILKNIKTYLQCEDN* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02153 712 SMART START_1 226 451 IPR002913 GO:0008289
Pte15g02153 712 SUPERFAMILY Bet v1-like 473 645 - -
Pte15g02153 712 SUPERFAMILY Homeodomain-like 43 116 IPR009057 -
Pte15g02153 712 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g02153 712 Gene3D - 45 127 - -
Pte15g02153 712 ProSiteProfiles START domain profile. 217 454 IPR002913 GO:0008289
Pte15g02153 712 Pfam START domain 226 451 IPR002913 GO:0008289
Pte15g02153 712 Pfam Homeodomain 58 113 IPR001356 GO:0003677
Pte15g02153 712 FunFam Homeobox-leucine zipper protein HDG1 44 131 - -
Pte15g02153 712 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 56 707 IPR042160 -
Pte15g02153 712 CDD homeodomain 62 113 IPR001356 GO:0003677
Pte15g02153 712 MobiDBLite consensus disorder prediction 1 65 - -
Pte15g02153 712 CDD START_ArGLABRA2_like 221 450 - -
Pte15g02153 712 Coils Coil 114 141 - -
Pte15g02153 712 Gene3D - 224 442 IPR023393 -
Pte15g02153 712 FunFam Homeobox-leucine zipper protein GLABRA 2 226 450 - -
Pte15g02153 712 SUPERFAMILY Bet v1-like 219 451 - -
Pte15g02153 712 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Pte15g02153 712 SMART HOX_1 57 119 IPR001356 GO:0003677
Pte15g02153 712 Coils Coil 165 185 - -
Pte15g02153 712 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02153 Pte-Chr15 30753585 30758473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02153 22 711 Homeobox Transcription Factor Family AT1G79840 64.438 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g02153 START 6.9e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02153 K09338 - qsu:111988083 1098.57