Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02140 ATGATGGCTGGAAACCCTAACTGGTGGAATGTTCATCCACCATCTATCATCTCTCCTCCATTTTTGTTTGGATCTCCTTCAGTTTCTTTGAATTCTCTGACGGACAGCCAAGAAACTACACAGTCATGGAGCCAGATGCTTCTGACTGGATTACCAATTGAAGACGAAGATAGGACAGGTATAAGTCATTTTCAAACAAAAAAATTGGGAAATTGGGATGACCATATTCTTAATCCAGCAACCGCAAGAGCTCCTATCCTTGATGCAATAAAGCAAGAAGTGTCTCACAGTAACAACTTATATTGCCATGGACATGAGGAATTTCAAGCATCTGGACCTATATGGTCGCACTCAAATATCATGCCAGTTTCATCTCCTCGGTCTTGTGTCACTAGCTTAAATAATAACATGTTGGATTTCACTTACAACAACGCAGACAGGAGGAACCATCTACAAGATCATGTATCTGAGTGTAACAGCACAGCCAACGCTGCCGTCTGTAAGAAAGCTAGGGTTCAACCCTCTTCTAGTCAACCACCCCTTAAGGTGCGAAAGGAGAAGCTAGGTGATAGAATAACTGCTCTACATCAGCTTGTATCCCCATTTGGAAAGACTGACACGGCTTCTGTGCTGTTAGAAGCCATTGGATATATCAGATTTCTTCAGGGTCAAATTGAGGCTCTCAGCTCTCCTTACTTGGGCAATGCATCCAAAAATATAAGGAATCAGCAGTCCGCCAATGTTGAAAGGAATTGTGTTTTCCCTGAAGACCCCGGTCAGCTGTTGAATGACACATGCCTGAAAAGAAAAGCAGCTACAAACCAGGATATTCAGGATAAGCCAAAGGACCTGAGGAGTCGAGGGTTGTGCTTGGTTCCTGTATCCTGCACCCAAAACGTTGGAAGTGACAATGGAGCTGATTACTGGGCACCTGCTTATGGAGGTGGATTTTGA 954 0.4371 MMAGNPNWWNVHPPSIISPPFLFGSPSVSLNSLTDSQETTQSWSQMLLTGLPIEDEDRTGISHFQTKKLGNWDDHILNPATARAPILDAIKQEVSHSNNLYCHGHEEFQASGPIWSHSNIMPVSSPRSCVTSLNNNMLDFTYNNADRRNHLQDHVSECNSTANAAVCKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNASKNIRNQQSANVERNCVFPEDPGQLLNDTCLKRKAATNQDIQDKPKDLRSRGLCLVPVSCTQNVGSDNGADYWAPAYGGGF* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02140 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 232 IPR036638 GO:0046983
Pte15g02140 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Pte15g02140 317 FunFam Transcription factor bHLH123 family 182 245 - -
Pte15g02140 317 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 54 299 - -
Pte15g02140 317 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Pte15g02140 317 Gene3D - 182 246 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02140 Pte-Chr15 30439335 30442726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02140 64 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 48.416 4.50e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02140 - - gmx:100802121 441.81