Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02132 ATGGAGGTTTACACGGGGGGCCATTTCGGTGCGGGGGTGGACCATTTATCACCGGATAAACGTCACACAGAGCATAAAACCGGCGAGAATTTCGTTGATGAACTGCTTGACTTTTCTAATGAAGAAGCCATTACAACCGAAGACTTTTTGGACAATGGTGCTGGAAATTCAACCTTCTCTTCCACCATTACCACCGTGGATAGCTGCAATTCCTCTGTTACAGGTGGTGATGAAAACCATTTCTCCTTCAACATGGGCTCTCATGGCTTTGCCGAATCTCAATTCTCTGACGACCTTGGTGTTCCGTACGAGGACTTGGCTCAGCTTGAATGGTTATCGAATTTTGTGGAGGACTCATTCTCAACTGAAGATGAGCTAAAAACACTTCATCTCCTCTCTGGCGCCAACGCTTACAATATTGCTACCAAACCGCAAACTCCTGAATCATCGTCTTCATGTGAAACTCCTAAAAATGCATCACAATTGTTCTACCCAGATACGCCGCTACCAGGCAAAGCTCGAAGCAAACGTTCACGCGCCGCCCCAGGTGATTGGTCCACTCGCCTCCTCCACGTGGTCAACCCAATGCCACACAATACAACCAACACAACTGAATTGATATCAACTGATATAAAAGCAATGCATTCCCAATCCACTCCAATCAAGAGAAGAGAGAATTTGAATTCAGACTCGAGTTCAGGTCGTAAATGTCTGCATTGTGCAACCGAGAAGACACCACAATGGCGAACTGGGCCAATGGGTCCGAAAACTCTATGCAATGCTTGCGGAGTTCGATATAAATCGGGTCGGTTGGTACCCGAATATAGGCCCGCTGCAAGTCCCACATTTGTGTCTACCAAACACTCGAATTCACATAGGAAGGTTTTGGAGCTGAGGAGGCAAAGAGAATTGTTGAGACAACAACAGCAACAATTTCTTGGTCAAACTTCAATTTTCGGAGTATCCAACGGTGGAGATGAATATTTGATCCATTGTCACAACGGACCAGATTATGGACACATGATATAA 1029 0.4568 MEVYTGGHFGAGVDHLSPDKRHTEHKTGENFVDELLDFSNEEAITTEDFLDNGAGNSTFSSTITTVDSCNSSVTGGDENHFSFNMGSHGFAESQFSDDLGVPYEDLAQLEWLSNFVEDSFSTEDELKTLHLLSGANAYNIATKPQTPESSSSCETPKNASQLFYPDTPLPGKARSKRSRAAPGDWSTRLLHVVNPMPHNTTNTTELISTDIKAMHSQSTPIKRRENLNSDSSSGRKCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQRELLRQQQQQFLGQTSIFGVSNGGDEYLIHCHNGPDYGHMI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02132 342 ProSitePatterns GATA-type zinc finger domain. 237 262 IPR000679 GO:0006355|GO:0043565
Pte15g02132 342 PANTHER GATA TRANSCRIPTION FACTOR 31 309 - -
Pte15g02132 342 MobiDBLite consensus disorder prediction 142 183 - -
Pte15g02132 342 Pfam GATA zinc finger 237 270 IPR000679 GO:0006355|GO:0043565
Pte15g02132 342 MobiDBLite consensus disorder prediction 216 236 - -
Pte15g02132 342 SMART GATA_3 231 281 IPR000679 GO:0006355|GO:0043565
Pte15g02132 342 FunFam GATA transcription factor 227 312 - -
Pte15g02132 342 CDD ZnF_GATA 236 283 IPR000679 GO:0006355|GO:0043565
Pte15g02132 342 PIRSF Txn_fac_GATA_plant 13 322 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pte15g02132 342 MobiDBLite consensus disorder prediction 142 162 - -
Pte15g02132 342 ProSiteProfiles GATA-type zinc finger domain profile. 231 267 IPR000679 GO:0006355|GO:0043565
Pte15g02132 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 233 294 - -
Pte15g02132 342 Gene3D - 230 281 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02132 Pte-Chr15 30363442 30364743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02132 93 343 C2C2-Gata Transcription Factor Family AT5G25830 47.464 1.66e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte15g02132 GATA 7.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02132 - - qsa:O6P43_018201 422.165