Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02129 ATGGCAATGTCCTGCAAGGATGGTAAGCCCGGAATGGATAACGGAAAGTATGTACGTTATACACCTGAGCAGGTTGAAGCCCTCGAGAGGCTTTATCATGAATGTCCTAAACCCAGTTCGATTCGCCGCCAGCAGCTTATTCGTGAGTGCCCAATACTCTCAAACATCGAGCCGAAACAAATCAAAGTTTGGTTCCAGAATAGAAGATGTAGAGAGAAGCAGAGAAGAGAAGCTTCACGCCTTCAAGCTGTGAATAGGAAGTTGACGGCCATGAACAAGCTTCTCATGGAAGAGAATGATAGGTTGCAGAAGCAGGTTTCGCAACTTGTGCATGAGAATGGCTACTTCCGTCAGCATGGCCAGAATACTGCGCTGTCAACTAAAGACACCAGCTGTGAATCGGTGGTGACTAGTGGTCAGCATAATTTGACCTCTCAGCATCCGCCAAGGGATGCAAGTCCTGCAGGACTTTTGTCCATTGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCACGGATGCAGTGGTGTGGCAGCACGAGCCTGTGGCCTGGTGGGTCTTGAACCCACAAGGGTAAGTGAAAGTTTCTATTTTTGGTGTATACTTTTCTTTCAGAGTTTGGGCAAACTAGCTATAAGACTACTTCAGGTCGCAGAAATCCTCAAGGATCGGCCATCATGGTTCCGTGATTGCCGAGCTGTGGATGTTTTAAATGTGCTGCCCACTGCAAACGGTGGAACCATAGAGCTGCTTTACATGCAGTTCTATGCGCCAACAACTTTGGCGCCTGCTCGTGACTTCTGGTTGTTGCGATATACTTCTGTTCTAGAAGATGGCACCCTTGTGGTCTGTGAGAGGTCACTAAAAAATACTCAAAATGGTCCAAGTATGCCTCCAGTGCAGCATTTTGTGAGAGCTGAGATGCTGCCTAGTGGGTATCTTATCCGCCCTTGTGAAGGAGGTGGATCCATTATTCACATCGTTGATCACATGGACTTGGAGCCTTGGAGTGTACCTGAAGTACTGCGCCCTTTATATGAATCATCTACTGTTTTGGCACAAAAGACGACAATGGCTGCTTTACGTCAATTGAGGCAGATAGCTCATGAGGTTTCTCAGTCTAATGTCACTGGTTGGGGTAGGCGCCCTGCAGCTTTGCGTGCATTGGGCCAAAGATTGAGCCGGGGATTTAATGAGGCGCTTAATGGGTTTACTGATGAGGGTTGGTCAATGATGGGCAATGATGGCATGGATGATGTTACGATTCTTGTAAATTCATCTCCTGAAAAACTAATGTCTCTTAATCTACCCTTTGCTAATGGATTTCCGGCAGTCAGTAATGCAGTGCTGTGTGCCAAAGCCTCTATGCTATTACAGAATGTCCCTCCGGCCATTCTTCTTAGGTTTCTCCGGGAGCATAGATCAGAATGGGCGGACAACAACATGGATGCTTATTCCGCTGCAGCCATTAAAGTTGGTCCTTGTAGCTTGCCAGGTTCTCGTATTGGAAGTTATGGCAGTCAAGTAATACTTCCTCTCGCACACACTATTGAGCACGAAGAGTTCCTTGAAGTCATAAAATTGGAAGGGATTGGGCATTCTCCAGAAGATGGACTTATGCCCAGGGAGATAGTTCTTCTGCAACTTTGCAGTGGAATGGATGAAAATGCCGTAGGCACCTGTGCAGAACTTATATTTGCTCCTATAGATGGTTCTTTTGCTGATGATGCACCCCTTTTGCCTTCTGGTTTTCGAATTATTCCCCTTGATTCTGGCAAGGAGGCCTCCAGTCCAAATCGTACACTTGACCTTGCATCTGTTCTTGATGTTGGGCCTGCTGGAAATAGAGCTTCTAATGACCGTACTGGCTCTTCAGGCTGTGTGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGTCATATGCAAGAACATGTAGCGGCCATGGCAAGACAATATGTTCGTAGTATTATATCATCAGTTCAAAGGGTGGCACTAGCACTTTCTCCTTCTCATTTAAGTTCAAATGGTTGCCTTCGATTACCTCTGGGCACTCCCGAAGCACAAACACTTGCTCGTTGGATCTGCAACAGTTACAGATGCTACTTGGGAACGGAGCTTTTCAAATCTAGCAGTGAAGCGAATGAATCCATCCTTAAGAGCTTGTGGCACCATTCAGATGCAATACTCTGCTGCACCCTGAAGGCGTTGCCAGTTTTCACTTTTGCAAATCAGGCAGGACTTGACATGCTTGAAACTACCTTAGTTGCTCTACAAGATATAGCTCTGGAGAAGATATTTGACGATCACGGACGGAAGCTTCTTTGCTCTGAGTTCCCGCAAATTATGCAACAGGGTTTTGCTTGCATTCAAGGTGGTATCTGCTTGTCAAGCATGGGACGGCCAGTATCATATGAGAGGGTTGTTGCTTGGAAGGTGTTAAATGAAGAAGAGAATGCTCACTGCATTTGCTTTATGTTTATGAACTGGTCTTTCGTGTAA 2589 0.4596 MAMSCKDGKPGMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRREASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENGYFRQHGQNTALSTKDTSCESVVTSGQHNLTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCSGVAARACGLVGLEPTRVSESFYFWCILFFQSLGKLAIRLLQVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQFYAPTTLAPARDFWLLRYTSVLEDGTLVVCERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQIAHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMMGNDGMDDVTILVNSSPEKLMSLNLPFANGFPAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLPGSRIGSYGSQVILPLAHTIEHEEFLEVIKLEGIGHSPEDGLMPREIVLLQLCSGMDENAVGTCAELIFAPIDGSFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASVLDVGPAGNRASNDRTGSSGCVRSVMTIAFEFAFESHMQEHVAAMARQYVRSIISSVQRVALALSPSHLSSNGCLRLPLGTPEAQTLARWICNSYRCYLGTELFKSSSEANESILKSLWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKLLCSEFPQIMQQGFACIQGGICLSSMGRPVSYERVVAWKVLNEEENAHCICFMFMNWSFV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02129 862 FunFam Homeobox-leucine zipper protein REVOLUTA 16 71 - -
Pte15g02129 862 SUPERFAMILY Homeodomain-like 14 79 IPR009057 -
Pte15g02129 862 CDD bZIP 68 107 - -
Pte15g02129 862 ProSiteProfiles START domain profile. 150 390 IPR002913 GO:0008289
Pte15g02129 862 Pfam MEKHLA domain 719 861 IPR013978 -
Pte15g02129 862 ProSiteProfiles 'Homeobox' domain profile. 11 75 IPR001356 GO:0003677
Pte15g02129 862 Coils Coil 71 112 - -
Pte15g02129 862 Gene3D - 233 400 IPR023393 -
Pte15g02129 862 Gene3D - 11 82 - -
Pte15g02129 862 SMART START_1 159 394 IPR002913 GO:0008289
Pte15g02129 862 SMART HOX_1 13 79 IPR001356 GO:0003677
Pte15g02129 862 CDD homeodomain 16 73 IPR001356 GO:0003677
Pte15g02129 862 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 12 862 IPR044830 GO:0003700
Pte15g02129 862 Pfam Homeodomain 16 74 IPR001356 GO:0003677
Pte15g02129 862 CDD START_ArGLABRA2_like 154 395 - -
Pte15g02129 862 Pfam START domain 160 221 IPR002913 GO:0008289
Pte15g02129 862 Pfam START domain 243 393 IPR002913 GO:0008289
Pte15g02129 862 SUPERFAMILY Bet v1-like 159 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02129 Pte-Chr15 30307524 30315632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02129 1 814 Homeobox Transcription Factor Family AT1G52150 83.109 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g02129 START 5.2e-40 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02129 K09338 - cave:132186143 1572.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g02129 15 30307524 30315632 Pte15g02129 15 30307524 30315632 RCT