Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02127 ATGCCGGTACTGCGTGGTGGAGTGCGCAGGGGCCGGGCAGCAGCGAGGAAGGATATAGAACAGGAGAAGCAAGGTGCACTGCCGAATCCAATTGAAGAAGGCGAGGCTATTGCAACGAGAACTAGGAGGAGGAGAGCGGCGGCGGCGGCGGCGGCAGCTGGAGGACAAGGAGTTGTGACAAAGCCGAAAGAAGCAGTGGTAGCTACTAAAACGAAGAAGAGAAAGCAGGAGGAGAATAAGAAGGTTGGGATAAATGAAAACATAGCTCTACCAGAGGGGAAGAAGGAAGAGAAGAAAAGTTTAGAAGCACAGAAGCAGAAGGTTGACGTTGGTATTGCTGGTGAGGCTGGAAAAGAAGAGGTGGGTGAGAAACAGATGGATGAATTCAATAGTGGTGGTAGGAGTGATAAGGGTAGTGCTGGTGACGATGAAGGGACTACTGCTCCACTTCCAGAAAAGGTGCAATTAGGAACTTCCCCCGTCTATAGATTGGATAGGAAGTTGGGCAAGGGTGGTTTTGGACAAGTGTATGTTGGTAGACGCTTGTCTACTGCAAATGCCAATGAGAGAACTGGTCCTGCGGCTCTCGAGGTTGCATTGAAATTCGAGCATGTAAATAGCAAAGGTTGTAGTTATGGGCCACCATATGAGTGGCAGGTGTACAGTGTTCTTGGTGGAAGCCATGGCGTGCCACGAGTACACTACAAGGGTCGTTTAGGCGATTATTATGTTATGGTTATGGATATGCTTGGTCCCAGTCTATGGGATGTTTGGAACAACAAGTCTCACATCATGTCAGTTGAAATGGTTGCTTGTATTGCTGTTGAAGCTATATCCATATTGGAGAAGATGCATTCACGAGGGTATGTTCATGGAGATGTGAAGCCAGAAAACTTTCTGCTTGGTCCTACAGGAACTCCAGAGGAGAAAAAGCTGTTTCTAGTTGATCTTGGTTTAGCTACTAGATGGCGAGATGGCAGCACAGGTTTGCATGTTGAATACGACCAAAGACCAGACGTTTTCAGGGGCACCGTTCGTTATGCTAGTGTACATGCACATCTTGGGAGAACTGGAAGTAGAAGAGATGATCTAGAGTCTCTTGCTTACACACTTATTTTCCTTCTTCGAGGTCGTTTGCCTTGGCAAGGCTACCAGGGAGAGAATAAAGGCTTTCTTGTTTGCAAGAAAAAGATGGGCATTTCTCCAGAGACCCTTTGTTGCTTCTGTCCGCAGCCTTTTAGACAGTTTGTGGAATATGTTGTGAACTTGAAGTTTGACGAAGAACCTAGTTATGCAAAATATATTTCTTTATTTGATGGAATTATCGGTCCCAACCCAGATATTAGGCCAATAAACACTGATGGTGCACAAAAGCTGATTGGTCACAAGAGAGGTCGTTTGGCCATAGAAGAAGTAGAAGATGATGGTCAACCAAAGAAGAAAATTAGAATGGGTATGCCAGCAACACAATGGATCAGTATTTACAATGCACGTCGTCCAATGAAGCAAAGGTATCATTACAACGTGGCAGATGTGAGACTAGCCCAACACATTGAAAAAGGAAATGAGGATGGTTTGTTTATCAGCAGTGTAGCTTCATGCCAAAACCTATGGGCCATAATAATGGATGCAGGAACTGGATTTGGATCTCAAGTTTATGAACTTTCCCCCGATTTTCTCCACAAGGAGTGGATAATGGAGCAATGGGAAAATAAATACTATATTAGTTCAATAGCTGGAGCCACAAATGGGAGCTCACTAGTTGTGATGTCTAGGGGAACACCATACTCGCAGCAGTCATATAAAGTTAGTGAATCATTTCCATTCAAATGGATTAACAAAAAATGGAGGGAGGGGTTCTTTGTAACAGCAATGGCCACTGCAGGGAGTAGGTGGGGAGTGGTGATGTCTCGGGGGGCAGGATATTCTGACCAGGTGGTTGAACTAGATTTTCTTTATCCTAGTGAAGGTATTCACAAGAGATGGGACTATGGTTACCGTATTACTGCAACTGCAGCAAATGGGGACCAGGCAGCTTTTGTGCTGAGTGTCCCAAAGAGAAGACCTGCAGATGAAACGCAGGAAACACTCAGGACCTCAGCTTTCCCAAGTACGCATGTGAAGGAAAAATGGGCCAAGAATCTGTACATTGCCTCTATTTGTTATGGACGCACAGTTTCTTGA 2184 0.4528 MPVLRGGVRRGRAAARKDIEQEKQGALPNPIEEGEAIATRTRRRRAAAAAAAAGGQGVVTKPKEAVVATKTKKRKQEENKKVGINENIALPEGKKEEKKSLEAQKQKVDVGIAGEAGKEEVGEKQMDEFNSGGRSDKGSAGDDEGTTAPLPEKVQLGTSPVYRLDRKLGKGGFGQVYVGRRLSTANANERTGPAALEVALKFEHVNSKGCSYGPPYEWQVYSVLGGSHGVPRVHYKGRLGDYYVMVMDMLGPSLWDVWNNKSHIMSVEMVACIAVEAISILEKMHSRGYVHGDVKPENFLLGPTGTPEEKKLFLVDLGLATRWRDGSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGISPETLCCFCPQPFRQFVEYVVNLKFDEEPSYAKYISLFDGIIGPNPDIRPINTDGAQKLIGHKRGRLAIEEVEDDGQPKKKIRMGMPATQWISIYNARRPMKQRYHYNVADVRLAQHIEKGNEDGLFISSVASCQNLWAIIMDAGTGFGSQVYELSPDFLHKEWIMEQWENKYYISSIAGATNGSSLVVMSRGTPYSQQSYKVSESFPFKWINKKWREGFFVTAMATAGSRWGVVMSRGAGYSDQVVELDFLYPSEGIHKRWDYGYRITATAANGDQAAFVLSVPKRRPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02127 727 MobiDBLite consensus disorder prediction 66 82 - -
Pte15g02127 727 ProSitePatterns Protein kinases ATP-binding region signature. 168 201 IPR017441 GO:0005524
Pte15g02127 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Pte15g02127 727 ProSiteProfiles Protein kinase domain profile. 162 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02127 727 SUPERFAMILY Protein kinase-like (PK-like) 162 445 IPR011009 -
Pte15g02127 727 Gene3D Transferase(Phosphotransferase) domain 1 126 474 - -
Pte15g02127 727 PANTHER CASEIN KINASE-RELATED 159 693 - -
Pte15g02127 727 MobiDBLite consensus disorder prediction 112 141 - -
Pte15g02127 727 MobiDBLite consensus disorder prediction 1 33 - -
Pte15g02127 727 CDD STKc_CK1 162 438 - -
Pte15g02127 727 SMART serkin_6 162 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02127 727 Pfam Protein kinase domain 162 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02127 727 MobiDBLite consensus disorder prediction 48 156 - -
Pte15g02127 727 FunFam casein kinase 1-like protein HD16 135 483 - -
Pte15g02127 727 MobiDBLite consensus disorder prediction 90 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02127 Pte-Chr15 30240622 30245822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02127 141 381 EF-hand Containing Proteins AT2G17890 25.703 4.77e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pte15g02127 Pkinase 4.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02127 - - tcc:18596008 1167.91