Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02123 ATGACTCGGCGGTGCTCGCACTGTAGCAATAACGGGCATAACTCACGAACCTGCCCATCTCGTAGCAGTAGCGGCAATGGAGGCTTGAAACTTTTTGGCGTGAGGCTAACCGATGGATCAATCATCAAGAAAAGCGCCAGTATGGGTAACCTATCGGCGCACTACCATTCATCTTCGTCAGCCGCTGCTTCACCCAATCCGAGCTCACCTTGCTCGGACTCTCTTCGGGACCCGGTTAATGAACCCGAAGGTTACTTATCCGATGATCCGGTTCGCGCTTCTTGTTCAGTTAATCGCCGCGCTGAGAGGAAGAAAGGTGTCCCGTGGACAGAGGAAGAACATCGGTTGTTCTTAATTGGCCTTCAGAAATTAGGGAAAGGAGACTGGCGTGGCATAGCACGCAATTATGTGGTGACAAGGACACCGACTCAAGTGGCAAGTCATGCTCAGAAGTATTTTATTAGACAGAGTAATGCTACTCGAAGAAAGAGACGATCCAGCCTCTTCGATATGGTTCAAGATACGGGTTCAGAACAACCTTCAGTGCCAGAAGACCAAGTATTATCACCACCTTCTAGTAACTCACAACCTGAAAAGATGATATCTCAACCTTCATTGTATCTCTCTCTCAACTCCGAATTCAAACCCTTGGAAGCTGCTTCTCAGGAACCGTTGATGGAAACTGAAAAACCTGTCATGGAATCAGGTGGATCAAATGGGTTACCACCTGCAGTTCCTTCATTTTTCCATGCTTATTTACCTGTTCCATATCCATTATGGTCACCGGCTGCAGCAACCTATGGAGAAGTCTATGATGCTGACACATCTCATCATCAGGTTCTCAAACCAATTCCAATTATCCCCAAGGAGCCTGTTAATGTTGATGAACTTGTTGGCATGTCTCATCTTACACTTGGGGATGGCGAGAGACGTGACAGAGACCCTTCACCACTCTCCTTGAAGTTGATAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCCGTTAGTGGTTCAGATTTGACGAAAGGCAAGAACGAGGCTATTAGTGCAGTTTGA 1065 0.4742 MTRRCSHCSNNGHNSRTCPSRSSSGNGGLKLFGVRLTDGSIIKKSASMGNLSAHYHSSSSAAASPNPSSPCSDSLRDPVNEPEGYLSDDPVRASCSVNRRAERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVVTRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVQDTGSEQPSVPEDQVLSPPSSNSQPEKMISQPSLYLSLNSEFKPLEAASQEPLMETEKPVMESGGSNGLPPAVPSFFHAYLPVPYPLWSPAAATYGEVYDADTSHHQVLKPIPIIPKEPVNVDELVGMSHLTLGDGERRDRDPSPLSLKLIGEPSRQSAFHANAPVSGSDLTKGKNEAISAV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02123 354 MobiDBLite consensus disorder prediction 173 201 - -
Pte15g02123 354 ProSiteProfiles SANT domain profile. 109 157 IPR017884 -
Pte15g02123 354 Gene3D - 107 158 - -
Pte15g02123 354 MobiDBLite consensus disorder prediction 332 346 - -
Pte15g02123 354 PANTHER TRANSCRIPTION FACTOR KUA1 3 283 - -
Pte15g02123 354 MobiDBLite consensus disorder prediction 331 354 - -
Pte15g02123 354 MobiDBLite consensus disorder prediction 56 91 - -
Pte15g02123 354 MobiDBLite consensus disorder prediction 1 24 - -
Pte15g02123 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
Pte15g02123 354 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Pte15g02123 354 SUPERFAMILY Homeodomain-like 103 158 IPR009057 -
Pte15g02123 354 FunFam transcription factor MYB1R1 107 158 - -
Pte15g02123 354 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Pte15g02123 354 CDD SANT 108 153 IPR001005 -
Pte15g02123 354 SMART sant 105 155 IPR001005 -
Pte15g02123 354 MobiDBLite consensus disorder prediction 56 75 - -
Pte15g02123 354 NCBIfam myb-like DNA-binding domain, SHAQKYF class 104 156 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02123 Pte-Chr15 30202403 30205687 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g02123 Myb_DNA-binding 4.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02123 - - qsa:O6P43_027717 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g02123 15 30202403 30205687 Pte15g02123 15 30202403 30205687 RCT