Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02119 ATGGCAGACCTATCCCTTCCATCACTCCCCGTAGGTATCAGATTTGCACCAAGTGATCAACAACTCATACTCAATTATCTATACAATACTGTGATTGGAAAGCAGCTCACCAATTGGAATGTCTCGTACTGCAATCTTTATGGTGATATGAGTCCATCTCAAATATGGGAATTAGCTTCTGGAAAAGGGTTGATCTCTGCACAAGATGAAGCTACAGATGCTTACTTCTTCACCAAATTAAAGAAGGTCAGCCCTACTGGTGAACGGTTCATACACACTGCTGCTAAGGGTACATGGCATGGAGAGGATTCAGGTACAAAAATCATGGCGGTGTTTGAAGGCAGGAAGCAATGTATAGGCTTCAAGAAAAGATCATGCATTGGAGAAACAATATTTAATGGACATGCATCACCAAAGAAGCTGCATCAAGAGAACCCTGCTATTTCACAAGTGATCTCAAATCCCACGTTACTGCAGGGGCCTGCTGTATTGGTGGGTGATACTGCAGAGAAAAATGGCTCATCATCACAAGCATTTCTCCAGGATCATGGTGAAAAGCAAGAGGAAAACAATGCTGAGGCTGATTTCATGGGAGACCTGAGAGACATTACTTTTGATGATCTGGGAGCCATTACTTTTGATGATCTGACGGAAGTGGACATTACTTCACTTCTTGACTTCGAGAGTATATGA 693 0.4257 MADLSLPSLPVGIRFAPSDQQLILNYLYNTVIGKQLTNWNVSYCNLYGDMSPSQIWELASGKGLISAQDEATDAYFFTKLKKVSPTGERFIHTAAKGTWHGEDSGTKIMAVFEGRKQCIGFKKRSCIGETIFNGHASPKKLHQENPAISQVISNPTLLQGPAVLVGDTAEKNGSSSQAFLQDHGEKQEENNAEADFMGDLRDITFDDLGAITFDDLTEVDITSLLDFESI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02119 230 Pfam No apical meristem (NAM) protein 10 124 IPR003441 GO:0003677|GO:0006355
Pte15g02119 230 ProSiteProfiles NAC domain profile. 9 181 IPR003441 GO:0003677|GO:0006355
Pte15g02119 230 PANTHER NAC TRANSCRIPTION FACTOR 56 9 124 - -
Pte15g02119 230 SUPERFAMILY NAC domain 5 124 IPR036093 GO:0003677|GO:0006355
Pte15g02119 230 Gene3D NAC domain 18 130 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02119 Pte-Chr15 30137088 30138363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02119 8 123 NAC Transcription Factor Family AT5G17260 29.310 4.23e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g02119 NAM 7.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02119 - - qsa:O6P43_027034 85.8853