Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02116 ATGATTTTACCTCTGTCTCAAAATTCAGAAAAAGAAAACTTTGAACTGTTGCCGACAGCAATGAGTATTTTAAGACATCCTCACTTAAAAATACTAGTGTTTCTTCTCATTCTTATTCAAATTCACTCGGTCTGTTCTTACCCAAATCCAATGAACTGTACGGATACCGCTAGGCTATGCACATCTTTCTTAGCCTTCCAGCCCCAGCAAAACCAAACGCTTGCTGTCATCCAAAGCATGTTTGATGTGTTGCCCGGTGATGTTACGGTTGAAGGAAATGGGCGGGATTATGTCTTCATTAAGAAAAATTGTTCATGTGCGTCAAGTATAAAAAAGTATTTAACCAATACTACATATACAGTGAGGTCCAACGGGGGGTTTGTGTACGATATGGTGATTAATGCCTACGATGGGTTGGCTTTCTTACCCAACACAACCAGGAAAGCAAAAAATGGTGCTGTGATATCATTGACATTGTTCTGTGGTTGCTCTAGTGGATTGTGGAACTACTTGATGAGCTATGTCATGAAAGATGGAGATACTATTGCATCTTTGTCTAGTCGATTTGGTCTCAGTATGGATGATATCGAGAAAGTGAATGGAATAACTGATCCTGCTAATGTCACAGTTGGTTCTCTATTTTACATACCATTAAATTCAGTTCCTGGTGACCCCTATCCATTACAGAATGACATTTCTCCTGCTACCACTCCTGCTGCCGCTCCTGCCACAACTGCCGACAGTTTTCCAGTGAATCAAGTTGATCATAAAACTCATGTACCATATGTGTGGATTGTTGGGGGTCTTGGTGTTGTTCTGGCTCTGATTTTGTTAAGCGTAGCTGCTTGTTGCTGCTTGAGATCATCCATTTGTGTTAGTGAAGGTAGAAGAAGCCACACAAAAGAAGCCAATGGAGATCTCTCTCATAAGTTTCATATTCTTCGAAATTCAAGTTTCTGTTGTGGTTCTGGAAGGTATATTTGTGGGAATTCTAGTGACTGCAAGCAAACGAATGGTGAAGCTAGTCAGCATCATCAGATTACAATTCCCAAAGCTCTTGGGAGTGATGTAATTGACATGGATAAGCCTATGGTGTTCACTTACGAAGAAATTTTCAACTCAACCAATGGTTTCTCTGATTCAAATTTGCTTGGACATGGAACTTATGGTTCTGTTTATTATGCCGTACTTCATGAACAGGAAGTAGCTATTAAAAGAATGACTGCTACTAAAACTAAAGAATTCCTTTCAGAGATGAAAGTCCTGTGCAGAGTTCATCATTCAAACCTGGTAGAATTGATCGGTTATGCTGCTAGCGATGATGAGCTCTTCATTATATATGAGTGCGCTCAAAAGGGATCACTTAGAAGCCATTTACATGATCCTGAAAGCAATGGTCATTCATCACTCTCCTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCCCGGGGTCTTGAATACATCCACGAGCACACAAAAACTCATTATGTCCATCGTGATATTAAGACAAGCAACATTTTGCTTGATGCTTCTTTCAGGGCCAAGATTTCAGACTTTGGGTTGGCAAAACTTGTAGGAAATACAAAAGAGGGAGATATTACGGCTACCAAAGTGGTTGGTACCTATGGTTACCTTGCTCCAGAATATTTGAGTGAAGGCCTTGCCACAGCCAAAAGTGATGTGTATGCTTTCGGTGTAGTTCTTTTTGAGATTATATCAGGCAAGGAAGCAGTCATACGAACTCAAGGGACCCTGACAAAAAATCCTGAAAGACGTTCACTTGCATCAATTATGTTAGCTGCTATAAGGAGTTTACCTGACTCCACGAGTATTTCAAGCATGAAAGATTACATTGATCCAAATATGCTGGATTTGTATCCTCATGACTGTCTATATAAGATGGTTGTCCTGGCAAAGCAATGTGTGGATGATGATCCAATCCTAAGACCAGACATGAAACAAGTGGTTATTTCTCTATCACAAATCCTTCTGTCATCGGTGGAGTGGGAAGCTACTCTGGCAGGGAATAGCCAAGTATTCAGTGGCCTCGTGCAAGGAAGATAA 2067 0.4074 MILPLSQNSEKENFELLPTAMSILRHPHLKILVFLLILIQIHSVCSYPNPMNCTDTARLCTSFLAFQPQQNQTLAVIQSMFDVLPGDVTVEGNGRDYVFIKKNCSCASSIKKYLTNTTYTVRSNGGFVYDMVINAYDGLAFLPNTTRKAKNGAVISLTLFCGCSSGLWNYLMSYVMKDGDTIASLSSRFGLSMDDIEKVNGITDPANVTVGSLFYIPLNSVPGDPYPLQNDISPATTPAAAPATTADSFPVNQVDHKTHVPYVWIVGGLGVVLALILLSVAACCCLRSSICVSEGRRSHTKEANGDLSHKFHILRNSSFCCGSGRYICGNSSDCKQTNGEASQHHQITIPKALGSDVIDMDKPMVFTYEEIFNSTNGFSDSNLLGHGTYGSVYYAVLHEQEVAIKRMTATKTKEFLSEMKVLCRVHHSNLVELIGYAASDDELFIIYECAQKGSLRSHLHDPESNGHSSLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGNTKEGDITATKVVGTYGYLAPEYLSEGLATAKSDVYAFGVVLFEIISGKEAVIRTQGTLTKNPERRSLASIMLAAIRSLPDSTSISSMKDYIDPNMLDLYPHDCLYKMVVLAKQCVDDDPILRPDMKQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02116 688 FunFam Kinase family protein 353 449 - -
Pte15g02116 688 SUPERFAMILY LysM domain 172 217 IPR036779 -
Pte15g02116 688 Gene3D Transferase(Phosphotransferase) domain 1 451 675 - -
Pte15g02116 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Pte15g02116 688 ProSitePatterns Protein kinases ATP-binding region signature. 384 405 IPR017441 GO:0005524
Pte15g02116 688 SUPERFAMILY Protein kinase-like (PK-like) 359 660 IPR011009 -
Pte15g02116 688 Gene3D Phosphorylase Kinase; domain 1 352 449 - -
Pte15g02116 688 Gene3D LysM domain 169 223 IPR036779 -
Pte15g02116 688 ProSiteProfiles LysM domain profile. 172 216 IPR018392 -
Pte15g02116 688 SMART LysM_2 173 217 IPR018392 -
Pte15g02116 688 FunFam PTI1-like tyrosine-protein kinase 3 450 674 - -
Pte15g02116 688 Pfam LysM domain 174 217 IPR018392 -
Pte15g02116 688 SMART serkin_6 378 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02116 688 ProSiteProfiles Protein kinase domain profile. 378 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g02116 688 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 682 IPR044812 GO:0019199|GO:0045087
Pte15g02116 688 Pfam Protein tyrosine and serine/threonine kinase 382 658 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02116 Pte-Chr15 30097926 30105065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02116 50 689 Receptor kinase-like Gene Family AT1G51940 68.168 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte15g02116 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02116 - - pcin:129289327 1016.14