Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02115 ATGGAGGGAAGGACTGAAAATGGGGAGGTGTGTCCTCAACTTCTAGATTTGATCCCCAAAGAGAGAGAGTGGCTGACGAACAGGGATGGAAGTAGAAACCGCAAGTCCGCCGAGGAGGGGAAACTGGAGTTGAGGCTTGGTCCACCGGTAGAGGACTGGACTTCTAAGGACCATATGAAAGAGAGAAATGAGTCTCTTCTCTCTCTTGGCTACTTCTCCGTAAATCAGAAGGGTCAGAACACTACCATAGGCACTTTCAATAGTGGTTCTGATAAAGCAGCTGCTGCTGCTACTTTGTCCTCTCCTTGGTGTTTCCAGCAGGGCATGAGCCAGCATAATCAACAGCTCCAGTTATCATCAGAGACACAGAGCTTTCCAGTTATGGTGAAGGAGGTACCACAGGGATGTAGCCCTAAAGTGGTAGACTTGAACAATGGAGAAAAGAAAGCATTTTTACCATCTTCTGCAAATACAGCTGTGCCTAACAGCTCTCAGAAAAGAACTGCACCTGGTCCAGTTGTGGGTTGGCCCCCAATTAGATCATTCAGGAAGAATCTTGCAAGCAACAACTGTTCAAAACCATGTTCTGACTCTCAGCATCAGGATGTTGATTCAGACAAGGCCAATGGTAAGAAGCCAGTCGACACCAGCTGCAGCAAAGGCATGTTTGTCAAGATTAACATGGATGGTGTCCCTATTGGAAGAAAAGTAGACCTCCATGCTTATGGCAGCTATGAACAACTCTCTTCTGCTGTTGACGAACTCTTCAGAGGACTACTTGCTGCTCAAAGAGATTCCTGTGCTGGTGGAATACAGAACAATGAAGAAGAGAAGAAAGCAATTACTGGTGTATTGGATGGGAGTGGGGAATATACCTTGGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGAGATGTGCCTTGGCACATGTTTGTCTCAACAGTGAAGAGGCTGCGTGTGTTGAAGAGCTCTGAGCTTCCTTCTCTTAGCCTTGGGTGTAAGCAAGAAAGAGACCCCCCATCTGCCACTGTCATTGAAATGATACAGTAG 1056 0.465 MEGRTENGEVCPQLLDLIPKEREWLTNRDGSRNRKSAEEGKLELRLGPPVEDWTSKDHMKERNESLLSLGYFSVNQKGQNTTIGTFNSGSDKAAAAATLSSPWCFQQGMSQHNQQLQLSSETQSFPVMVKEVPQGCSPKVVDLNNGEKKAFLPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRKNLASNNCSKPCSDSQHQDVDSDKANGKKPVDTSCSKGMFVKINMDGVPIGRKVDLHAYGSYEQLSSAVDELFRGLLAAQRDSCAGGIQNNEEEKKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELPSLSLGCKQERDPPSATVIEMIQ* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02115 351 ProSiteProfiles PB1 domain profile. 221 330 IPR000270 GO:0005515
Pte15g02115 351 Gene3D - 216 337 - -
Pte15g02115 351 MobiDBLite consensus disorder prediction 153 176 - -
Pte15g02115 351 MobiDBLite consensus disorder prediction 199 213 - -
Pte15g02115 351 MobiDBLite consensus disorder prediction 22 43 - -
Pte15g02115 351 MobiDBLite consensus disorder prediction 190 214 - -
Pte15g02115 351 FunFam Auxin-responsive protein 216 336 - -
Pte15g02115 351 SUPERFAMILY CAD & PB1 domains 213 322 - -
Pte15g02115 351 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 328 IPR003311 GO:0005634|GO:0006355
Pte15g02115 351 MobiDBLite consensus disorder prediction 153 169 - -
Pte15g02115 351 Pfam AUX/IAA family 42 331 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02115 Pte-Chr15 30040557 30044684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02115 190 334 B3 DNA Binding Superfamily AT4G23980 30.189 8.11e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pte15g02115 AUX_IAA 2.7e-69 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02115 K14484 - jre:108985056 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g02115 15 30040557 30044684 Pte15g02115 15 30040557 30044684 RCT