Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02095 ATGGCTGAAGTGAATTCTGAGGAGTGTTGTTTGGAGAATAAACAGTCAACTGCCGCTTCAAGCTCCTCTGTGTCTGAGAGCTGTGGTACTCCAGTTCCCAAGTCACCAGGATTAGGCAGCCCGGGTTCTACATCTCCCTCTCATCGGAGGGCAACTGGACCTATAAGGCGAGCCAAGGGTGGTTGGACAGCTGAAGAGGATGAGACTTTAAGAAAAGCTGTTACTCATTATAGGGGGAAGAGTTGGAAGAAAATAGCTGAGTTCTTCCCAGATAGATCAGAAGTTCAATGTTTACATCGATGGCAGAAAGTCCTCAATCCAGATCTTGTAAAAAGTCCATGGAGTCCTGAGGAGGATAAGACCATTGTTGAGCTGGTGGAGAAATACGGACCCACAAAATGGTCAGTGATAGCAAAGTCTTTACCTGGTCGCATAGGGAAACAATGCCGAGAGAGGTGGCACAATCATCTAAATCCAGACATAAAAAAGGATGCATGGACTTTAGAGGAGGAACTAGCCCTCATGAATGCTCATCAAATACATGGCAACAAATGGGCTGAAATAGCTAAGGTCTTACATGGAAGGACTGATAATGCAATAAAGAATCACTGGAATAGTTCCTTGAAAAAAAAAATAGATTTTTATATGGCTACTGGGAAACTTCCCCCATTAGCCAAAGATGGCTCCCAAACTGCTGTCAGAGATACAATTGGGCGTACTGAAGCTAAAACACTTGTCTGTTCAAACAAAGGTTTGCATATCAATGCTGAAACATCATCCCAAGCAACAGACGCTAGTAGACTGGATGGAGGAGTAAAGCACCTTCTAGGATCCTCATCAATGCCAAGAGATGCTGTTGACTCTTCAGGTGCAATTCCAAGTGTCTCTTCTGATTCTGATGTTCTAGCTTGTAAGCAAGCATCATCTGATCTAGATTTGAGCTGCAGTAATTCGGAGTCATTTCAAAGGTTTGATGGGACTAATGCAGAGTCAAAATTTAAGAATATGAAAGCTAACTCTTGGTGTGAGTTGGAGAATTGTACAAACAGTGGTGAGATGAATAATGTTAGAGCAACCCCCACTAATATGTCACCTGAAGGCCCCAAGTCTAACTATGGTTCCTTGTGCTATGAACCACCGCACTTTCAGTCTTCAATACCTCAGGAATCAGTTTCCTTGAATATGTTTTGCTTACAGAGTGAATACGGCTCTACATCTTTATCACCTACTAGTTTCTTCACTCCAACTTGTGTGAAGGGCATTAGTCCATGTATGCAGAGTCCTAAAGCTATACTGGCAATGTCAAAATCACTGCAGAGTCCTGAAGTTATTCTGAAAATTGCAGCAGACACATTCCCATATACTCCTTCCATATTAAGAAAAAGAAAAGCAGGAGCACAGATACATGCTACTCCTGAAAAAAAAGTCAAAGTCAATGGGGAATCTGCCAGAGAACTATTTCGTTTTTTAAATGAACAGGAACAAACAAATATGGAAAATTCAGAATCTAATGGGAAGATTTCATATGAGAGTCCAGTGAGTCATGCTGAAGATGACCCTATTCCTTCTACTGATAAGGTCGTCAATGTGTCTCCACCATACCGGTTAAGAACCATACGAACTGCAGTTTTCAGATCTGTGGAAAAACAACTTGAATTTGCATCTGACCTGTAG 1674 0.4188 MAEVNSEECCLENKQSTAASSSSVSESCGTPVPKSPGLGSPGSTSPSHRRATGPIRRAKGGWTAEEDETLRKAVTHYRGKSWKKIAEFFPDRSEVQCLHRWQKVLNPDLVKSPWSPEEDKTIVELVEKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAHQIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKIDFYMATGKLPPLAKDGSQTAVRDTIGRTEAKTLVCSNKGLHINAETSSQATDASRLDGGVKHLLGSSSMPRDAVDSSGAIPSVSSDSDVLACKQASSDLDLSCSNSESFQRFDGTNAESKFKNMKANSWCELENCTNSGEMNNVRATPTNMSPEGPKSNYGSLCYEPPHFQSSIPQESVSLNMFCLQSEYGSTSLSPTSFFTPTCVKGISPCMQSPKAILAMSKSLQSPEVILKIAADTFPYTPSILRKRKAGAQIHATPEKKVKVNGESARELFRFLNEQEQTNMENSESNGKISYESPVSHAEDDPIPSTDKVVNVSPPYRLRTIRTAVFRSVEKQLEFASDL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02095 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Pte15g02095 557 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Pte15g02095 557 MobiDBLite consensus disorder prediction 493 510 - -
Pte15g02095 557 FunFam Transcriptional activator Myb isoform A 111 162 - -
Pte15g02095 557 SUPERFAMILY Homeodomain-like 59 122 IPR009057 -
Pte15g02095 557 MobiDBLite consensus disorder prediction 9 30 - -
Pte15g02095 557 PANTHER MYB PROTEIN-RELATED 59 144 - -
Pte15g02095 557 Gene3D - 58 110 - -
Pte15g02095 557 Gene3D - 111 162 - -
Pte15g02095 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Pte15g02095 557 CDD SANT 113 157 IPR001005 -
Pte15g02095 557 FunFam Transcription factor MYB3R-2 164 230 - -
Pte15g02095 557 MobiDBLite consensus disorder prediction 1 63 - -
Pte15g02095 557 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Pte15g02095 557 Gene3D - 164 232 - -
Pte15g02095 557 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Pte15g02095 557 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Pte15g02095 557 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Pte15g02095 557 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Pte15g02095 557 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Pte15g02095 557 CDD SANT 62 105 IPR001005 -
Pte15g02095 557 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Pte15g02095 557 MobiDBLite consensus disorder prediction 493 529 - -
Pte15g02095 557 CDD SANT 165 208 IPR001005 -
Pte15g02095 557 SMART sant 110 159 IPR001005 -
Pte15g02095 557 SMART sant 162 210 IPR001005 -
Pte15g02095 557 SMART sant 58 107 IPR001005 -
Pte15g02095 557 FunFam Transcriptional activator Myb isoform A 58 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02095 Pte-Chr15 29750318 29755223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02095 2 555 MYB Transcription Factor Family AT3G09370 44.544 1.13e-136 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g02095 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02095 K09422 - qsa:O6P43_026527 646.351