Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02082 ATGAATTTCTCTTCGATTCCAGCTTATCTTGATCCAGCCAACTGGCAACAGCAGTCGAATCATCCACTAGGTGTTAGTAGTGGAACTAGCTCTCAGCTTCTTCCTCCACAACCACCATCTCTTCCTCCTCAACCACAACAATCGCAAGCTCATGGAGCCGTCGGTACAGGCTCAATTCGACCAGGTTCGATGGCTGACAGAGCTCGAATGGCCAACATTCCTGTGCCTGAGACTGCCCTAAAATGCCCAAGATGTGAATCTACAAACACCAAATTTTGTTACTTCAATAACTACAGTCTCTCTCAGCCCCGCCACTTCTGCAAGACGTGTAGAAGGTATTGGACAAGAGGAGGAGCCTTGAGAAGCGTTCCGGTCGGAGGTGGGTGCCGGAGAAACAAGAGAAGCAAAGCAAGTAGCTCAAAATCTCCCGCCAGCTCAGATCGCCAAACTGGTAGTACTGCTAGTTCTACCAATTCAATTTCTTCAAATACAGGTACTACAGCTGAGCTACTTGGCCTTACATCTCATCATATACCACCTCTGAGGTTCATGGCTCCAATTAGCCACTTGACTGACTTTCCAGCTGGAGAAATGGGCTTAAGTTATGGCCTAAGCTACAACCCAGTGTCTGCTCCAATTGCAGGAATGAACGACTTCACTTTTCAGATCGGAAATGCTTTGGGTGGAAGTGGTGTCAGTGTTGGTGGTGGCACTGGCTCCTTGGTGTCTGCCTCAGGTTTGGATCATCAATGGAAACTGCAACAAACACAGCAGTTTCCTCTTTTAGCTGGTTTGGAAACATCAACAGGACTATACCCTTTTGAAGGTCATGGAGTTGATGCTTCTTTATATGGTGGTGGAATAAGTCATATAAGGCCAAAACCAACTAGTACTTCAGGGTTGGTATCTCAGATGGCCTCAGTTAAAATGGAGGAGAGTCAAGAAATGAATTTGTCAAGGCAATTGTTAGGGATCAACAACAATCAATTTCAAGCAACTGATCATCAATATTGGACTAATATTAATGGTACCAATGCAACATGGACTGATCTTTCTGCCAATTTTAGCTCTTCCTCTACCACTAGCAATCACCTTTAA 1098 0.4517 MNFSSIPAYLDPANWQQQSNHPLGVSSGTSSQLLPPQPPSLPPQPQQSQAHGAVGTGSIRPGSMADRARMANIPVPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKASSSKSPASSDRQTGSTASSTNSISSNTGTTAELLGLTSHHIPPLRFMAPISHLTDFPAGEMGLSYGLSYNPVSAPIAGMNDFTFQIGNALGGSGVSVGGGTGSLVSASGLDHQWKLQQTQQFPLLAGLETSTGLYPFEGHGVDASLYGGGISHIRPKPTSTSGLVSQMASVKMEESQEMNLSRQLLGINNNQFQATDHQYWTNINGTNATWTDLSANFSSSSTTSNHL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02082 365 MobiDBLite consensus disorder prediction 14 63 - -
Pte15g02082 365 MobiDBLite consensus disorder prediction 138 163 - -
Pte15g02082 365 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
Pte15g02082 365 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Pte15g02082 365 MobiDBLite consensus disorder prediction 14 34 - -
Pte15g02082 365 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Pte15g02082 365 MobiDBLite consensus disorder prediction 124 163 - -
Pte15g02082 365 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 50 252 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02082 Pte-Chr15 29588213 29589770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02082 1 353 C2C2-Dof Transcription Factor Family AT2G37590 39.119 7.23e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte15g02082 zf-Dof 7.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02082 - - tcc:18597775 370.548