Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02072 ATGGAAGATCGTGAAGAAATTAAAGTAGCCGATGTTGCAGGAACGAGCAAAGATGAAGATACTTCCTCAAGAGTTTTCCCTTGCTTATTCTGTTCAAGAAAGTTCTACAGCTCTCAAGCTTTAGGTGGGCACCAAAATGCTCACAAGAAAGAGAGGACAGCAGCAAGAAAGGCTAAAAGGGCATCTGAATATGCACCTCTTTCCTACGCAACGCCCATGCCACCACCAGCAATGGTTTTTGCACCAAGCCATACTCATTTTGGTGCACTGAATCCATCTGTGTACATAACTGCCCATGCAGCTAACTTCCGTTATCTTCCTACACATCAATTATCAGACCAATTCGGATCAAATGGTGCGCCAAGGTTTGGCAATGCTTTCTACTATGATGATGGCTGTTCTAGCAGTAATCGTTTGTATGAAGGCGACGAAAACAAGAGCTGGCAAAGGAGCATGCGGTCCAATCAATTCAATGGAGAGGCTTCTGCCACCCATCTGTCAAAGATGAGGAGTGGGCATACTAACAATCTCGGGAATAGGATTACTGGTAGTAAAGATAAAGATCAGAAACTTGATCTGTCCCTCCATTTGTAG 594 0.4411 MEDREEIKVADVAGTSKDEDTSSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRASEYAPLSYATPMPPPAMVFAPSHTHFGALNPSVYITAHAANFRYLPTHQLSDQFGSNGAPRFGNAFYYDDGCSSSNRLYEGDENKSWQRSMRSNQFNGEASATHLSKMRSGHTNNLGNRITGSKDKDQKLDLSLHL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02072 197 MobiDBLite consensus disorder prediction 1 21 - -
Pte15g02072 197 SUPERFAMILY beta-beta-alpha zinc fingers 22 53 IPR036236 -
Pte15g02072 197 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 197 IPR044246 GO:0009788
Pte15g02072 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Pte15g02072 197 MobiDBLite consensus disorder prediction 1 18 - -
Pte15g02072 197 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Pte15g02072 197 Gene3D Classic Zinc Finger 6 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02072 Pte-Chr15 29283044 29283637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02072 1 51 C2H2 Transcription Factor Family AT5G48890 64.706 1.44e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02072 - - qsa:O6P43_016819 216.083