Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g02033 ATGGTGAAGGAAGGGAGTAGGGATTTCTCTTTGACAAACAAACGAACAGACGCAAGGAAGGAAGTAGGGATTTCTGCCGTTACTAACAAGGGTAGCAAGGTCAGCTCGTGTCAATTTGTTAAATTTCCAGCTAAAGTTTCAACACTTCAGCCTCTATTCCTACTCCAAGCTTCATTTTCCCTGAAAACCAGCTACATAGAAATGGCTGCCAATTTCTGGACCTCATCGCACTACAAGCAACTCCTGGATCAGGAAGAAGTGGACATAGTGCAACCGCTTGATAAAGAAAAGGGCATCACCCTTGAAGATTTCAAGCTCATAAAAATGCATATGGCCAATTATGTACTGAAATTGGCTCAACACGTCAAAGTGAGGCAAAGGGTCGTGGCCACTGCTGTTACATATATGAGACGGGTTTACACTAGGAAGAGTATGTCTGAATACGATCCCCGTCTAGTGGCTCCCACCTGCTTGTACTTGGCATCAAAGGCAGAAGAAAGCACTGTACAGGCAAAGCTGCTTGTGTTTTACATCAAAAGGTATACGGATGAGAAATACAAGTATGAGATCAGAGACATACTTGAAATGGAAATGAAGATACTTGAAGCTCTTAATTATTATCTGGTTGTCTTCCATCCATACCGTTCCTTGTCTCAGTTGCTCCAGGATGCTGGGCTAAATGACATGATCATGACCCAGTTAACTTGGGGGCTCGTAAATGATACCTACAAGATGGACCTTATCCTTGTTCATCCACCACATTTGATAGCCTTAGCTTGTATATACATTGCTAGTGTGCTCAAGGACAAAGACACCACTGCATGGTTTGAAGAGCTTCGTGTCGATATGAATGTGGTGAAGAATATCTCTATGGAGATGCTTGATTTCTATGAAGGCCCCCGAATGACTTCAGAAGAAAGAATTAACGTTGCTCTCAACAAACTTCCCATGAAGTCATAA 960 0.426 MVKEGSRDFSLTNKRTDARKEVGISAVTNKGSKVSSCQFVKFPAKVSTLQPLFLLQASFSLKTSYIEMAANFWTSSHYKQLLDQEEVDIVQPLDKEKGITLEDFKLIKMHMANYVLKLAQHVKVRQRVVATAVTYMRRVYTRKSMSEYDPRLVAPTCLYLASKAEESTVQAKLLVFYIKRYTDEKYKYEIRDILEMEMKILEALNYYLVVFHPYRSLSQLLQDAGLNDMIMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLKDKDTTAWFEELRVDMNVVKNISMEMLDFYEGPRMTSEERINVALNKLPMKS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g02033 319 SMART cyclin_7 215 295 IPR013763 -
Pte15g02033 319 SMART cyclin_7 113 202 IPR013763 -
Pte15g02033 319 Pfam Cyclin, N-terminal domain 110 208 IPR006671 -
Pte15g02033 319 CDD CYCLIN_AtCycC_rpt1 102 207 - -
Pte15g02033 319 FunFam cyclin-C1-2-like isoform X1 86 209 - -
Pte15g02033 319 Gene3D - 74 305 - -
Pte15g02033 319 PANTHER CYCLIN 85 302 IPR043198 GO:0006357|GO:0016538
Pte15g02033 319 SUPERFAMILY Cyclin-like 212 302 IPR036915 -
Pte15g02033 319 Gene3D - 86 209 - -
Pte15g02033 319 SUPERFAMILY Cyclin-like 71 210 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g02033 Pte-Chr15 28188467 28195342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g02033 126 265 Core Cell Cycle Gene Families AT5G27620 29.333 2.38e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g02033 K15161 - gmx:100784345 444.891