Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte15g02003 | ATGGAGAAAGGGGGAGGGGGAAGAGAAGTCAAGAGGCGCAGCGTGAAAGAGAAAGACAGGACAAACTGGAATGTTACCGGCTGTAATTTTTGTGTTAATACTGTGTCCACGGCATGTGTTGTTGACCTATTGAAATTACCAAAAAGCTTGTTTTCCTTTGGCGGCAAGGAACCTCACAAACAAAAAGGAACCCGCTGTAATCTTGCGAGAAAACAAGGGAGCATGGTAACAACTGTGCATCGAGAGTCCGAGAATCAAGGTTATTCATCAATGGCTGTTGAAGGACTAGACTTTTTGAAGAGGCGGAAGAGGAAAAGAGAACAACGTGTAGAAAAGAAACTCGTTGTCAATGAAAGAGTAGAGCTAAAGAGTATGGAAGAGGGATTTTTGGGCTCATGGCATCCTGGTATTGTCACTGCTTCTGGACCCCGGACGCGTCACGTTAGATATGACAATATCTTAGATGATAAGACCTTGGATAATCTTATTGAAAAGGTGAGCGTTTCAGCTATTCTGGATGGAAGTACTTGGCTGGAAGAGCGATGGCCCAAGAAATGTGGGAGTATAAGGCCAGTCCCTCCATTATTGACTTTTTTAAAAACAGACCTTCCTTATGGTCTCTGCGTTGATGTGTACTACGAGGAGGCTTGGTGGGAAGGTGTAATTTTTGATCATCAAAATGGTGAGGATCAGAGAATCATATTTTTTCCTGAATTGGGTGATGAGGTAAAAGCAGATATTAGCCAATTACGTATTACTCGAGACTGGAATGAGGCCACAGATACTTGGCAGCAACGTGGAAAGTGGATATTTCTTGAATTGATTAGGGAGTTTGAGCAAGAGTCTTTTATTGCTGTTTCAGTGAAGCAAATATGGTATGATCTACGGGCTAGAGGTGCTTTTATTAAGGTTGGCGACTGGACTCGTAATAGTAAAGAACTGTGGGAGCCTTTGGTGTTAGATGTTATTCATGAGTACAAGGAGCTCACTTTAAATGAAGTATTTTCAATTCTAGAATTTTCAAATGACTTCTTCAAAGATACGCCTGAGTTGAGAGAAAATGAAACAAATGATTTTGACCTGCTTTCCAAAGTGACTCGGTCTACCGTTGAGGTTGGCATTGCCCTAGAAACCTGCCCTAGGAATAGCGAATCCGAATTTCATCCTGAGGTTGGAGTTGCTGAAAATTTGCTTGAGAAGGTGGACAAAGCAATTGTGCGAGTGAACAATGATCGAAATGCTGGTGAGATTCCTCCGGTTGAAGAGAACTGTAGAGATCAACTACAGAATGGAATATCAAGCACATATAAGGATACTGACTCAGTTGCATTCGTCCCAGAGTGTGCAATGTTAGCACAAAAGGAATCTGGGGAACCAACTCAAGATGTACCTTTCTTTACAGAAGGAGAAATCCCATGCATTACATCTGTTGTCACTGAAGGAGAACTTGATAGAAATCGAAACAATGGACCATCTGACAGTATCAATTGGAAACCTAAATCTCTTCCTGATGGAGTATCCTGTATCCGAGCTGTTCAAATTTATGAGAGAACATCTTCCAGAAGTGTTAGGAATAATTATAAGCCTGAAGTCCTTAAACATCTCTCATACCATGGCTGGAAAAGGGAATCGTACCAAGATAATCGGTATCATAGAGTTCGATATCTATCTCCTGATGGGAAGCGCTACGGCTCACTGCTAACGGCATGCTCAGCAATAATAAAGCATGAGACAAGAATGGATTCTGAACCATCCCTGGACGACCGGGGAAGTCTGAGCTCTGCAACTGATGATACATTTTCAGACATAATAACTTTGAAACCAGAAAACAATCAGGAATCTGAGTGTTGCCCCAAAATTGTCCAACCTTGTTCTCCAGGTTCAGTGCTTGATCCTGAACTTTGTCCTGAGGCAATTGTGGAGTACATTTTGCATGCAAGAGATAAAGCCTCGAAGAATACCAAAAATATGAGATTGAAAGCTCAGAAGCACCTCTTAGCTGTAGGCTGGGAATTTTGTTTCTACACATCTAGAAGAACTAGGCAAATTCGATACATCTCACCTCGGGGACATACATATCCTTCTCTTCTAAAAGCTTGTGAGACTGTAATGAGCACTTCTGAACACTCGTGTACCAGCAAGGAGAATGACAATCTAATGAAAATTGACAAGTTATCATCTGGAAGAAGTGACAATTCTTCTGGAATGTGTTTTAGCTTCTCCCAATCAATAACACTTTCAGATCCAAATGAAAGGAGTACCATAGAGAAGAATTTATCGCATCCTTCTACACACCAATTGAAGAAAACTAATGCCAGAAATGTAAATCGAATGGAAAGCAGATTGTCTCAAAAATGGTATAAAGAGAGAGAATGCAAAGAAGGTCGACGTGGGAAGCGCATATTGCGATCAAGAAAGACTGTACAGCAAGTATTTGTGCCATGTTCTTCACACATAAAACCTCAAAATATGATTTCTTGGCTTGTAGACAATAATGTACTGGTTCGAAGGGACAAGGTATCTTATCGTGTTAATAAAACCAGTCGTTCAAAGCTTGCTGAGGGGATTATAATGTATGAGGGAATCAAGTGCAACTGTTGTCAGTTGATATTTAGTCTAACTGGCTTTGCAAACCATGCTACTGTAAGCAGTCACAGCAGACCAGCTGCTCATATATTTCTGGAAGATGGTAGGTCTTTATTAGAATGTCTGATGCAAATGAGAAATGATTCTAGTTTGATAACTTCTATCAGAGAGTCTCATGATGAGCTGAAAGATGATCAGCAAGTGAGTGAGAATGATCATATCTGTTCAGTTTGTCATTATGGCGGTGAAATAATTCTATGTGATCATTGCCCATCCTCATTCCACCCAAGCTGTGTCTATTTGAAGGACATTCCTGATGGTGACTGGTTTTGCCCGTCATGTTGCTGCAAGATTTGTGGGAAGAACAATTTCAAAGATGACAAAAATAACCATTTTCTTAGCTGCAGTCAATGTGAACGGAAGTATCATGTTCGTTGCCTGAAGAATATTGGTGTGAATAAGATAAGAGAACAGACTTGGTTTTGCTGCAATAATTGTGAGAAGATATATTTAGGCCTCCATAGAATTTTGGGAAAACCAATTCCAGTGGGTGTGAATGATCTAACTTGGACTTTAGTGAAGCATTTGAACTCAGACACTTGTGGTCTTCATTCCCATGGAACTGATTATCTGGCTGAGAGTTATTGCAAGCTCAATGTTGCTCTTGCTGTGATGCATGAATGTTTTGAGCCTGTAAATGACTCTTATACTAGAAGAGATCTCGTGAAAGACGTCATTTTCAGTAGATGGTCAGGGCTTCAACGTTTGAATTTTGAAGGCTTCTATACTATTCTTCTGGAAAGAGATGAGGAATTGGTGTCTGTGGCTACAGTAAGGGTCTATGGAGAGAAGGTTGCGGAAGTACCTCTAGTTGGGACTAGAGTTCAATATCGTCGGCTAGGAATGTGTAGAATGTTAATGAATCAGCTTGAAAAAAAGCTGATGGAACTTGGAGTGGAAAGGCTGGTTTTACCTGCTGTTCCTTGTGTGTTGAACACATGGACTTCTTCCTTTGGTTTCTCAAGCATTGCAAATTCTGAGAGATTGCAGTTTCTAGATTATACGTTCCTTGATTTTCAGGACACTATCATGTGCCAGAAGCTATTGAAGGATCCACCGGTGAAATCAATTATATTTGAAGAATCTCTTCCAAAATCTCATGATGCCTGTGGAAGTGATAGTGTTGAACATGAAGGATCAAGTCCCTCACCTGAAGCTGAAGATATTGAGAAGAGTGGAACAGAAAGATCTCATGAGACTTAA | 3849 | 0.4066 | MEKGGGGREVKRRSVKEKDRTNWNVTGCNFCVNTVSTACVVDLLKLPKSLFSFGGKEPHKQKGTRCNLARKQGSMVTTVHRESENQGYSSMAVEGLDFLKRRKRKREQRVEKKLVVNERVELKSMEEGFLGSWHPGIVTASGPRTRHVRYDNILDDKTLDNLIEKVSVSAILDGSTWLEERWPKKCGSIRPVPPLLTFLKTDLPYGLCVDVYYEEAWWEGVIFDHQNGEDQRIIFFPELGDEVKADISQLRITRDWNEATDTWQQRGKWIFLELIREFEQESFIAVSVKQIWYDLRARGAFIKVGDWTRNSKELWEPLVLDVIHEYKELTLNEVFSILEFSNDFFKDTPELRENETNDFDLLSKVTRSTVEVGIALETCPRNSESEFHPEVGVAENLLEKVDKAIVRVNNDRNAGEIPPVEENCRDQLQNGISSTYKDTDSVAFVPECAMLAQKESGEPTQDVPFFTEGEIPCITSVVTEGELDRNRNNGPSDSINWKPKSLPDGVSCIRAVQIYERTSSRSVRNNYKPEVLKHLSYHGWKRESYQDNRYHRVRYLSPDGKRYGSLLTACSAIIKHETRMDSEPSLDDRGSLSSATDDTFSDIITLKPENNQESECCPKIVQPCSPGSVLDPELCPEAIVEYILHARDKASKNTKNMRLKAQKHLLAVGWEFCFYTSRRTRQIRYISPRGHTYPSLLKACETVMSTSEHSCTSKENDNLMKIDKLSSGRSDNSSGMCFSFSQSITLSDPNERSTIEKNLSHPSTHQLKKTNARNVNRMESRLSQKWYKERECKEGRRGKRILRSRKTVQQVFVPCSSHIKPQNMISWLVDNNVLVRRDKVSYRVNKTSRSKLAEGIIMYEGIKCNCCQLIFSLTGFANHATVSSHSRPAAHIFLEDGRSLLECLMQMRNDSSLITSIRESHDELKDDQQVSENDHICSVCHYGGEIILCDHCPSSFHPSCVYLKDIPDGDWFCPSCCCKICGKNNFKDDKNNHFLSCSQCERKYHVRCLKNIGVNKIREQTWFCCNNCEKIYLGLHRILGKPIPVGVNDLTWTLVKHLNSDTCGLHSHGTDYLAESYCKLNVALAVMHECFEPVNDSYTRRDLVKDVIFSRWSGLQRLNFEGFYTILLERDEELVSVATVRVYGEKVAEVPLVGTRVQYRRLGMCRMLMNQLEKKLMELGVERLVLPAVPCVLNTWTSSFGFSSIANSERLQFLDYTFLDFQDTIMCQKLLKDPPVKSIIFEESLPKSHDACGSDSVEHEGSSPSPEAEDIEKSGTERSHET* | 1283 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte15g02003 | 1282 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 979 | 1031 | IPR013083 | - | |
| Pte15g02003 | 1282 | SMART | PHD_3 | 978 | 1029 | IPR001965 | - | |
| Pte15g02003 | 1282 | SMART | PHD_3 | 936 | 977 | IPR001965 | - | |
| Pte15g02003 | 1282 | SMART | agenet_At_2 | 112 | 197 | IPR014002 | - | |
| Pte15g02003 | 1282 | SMART | agenet_At_2 | 201 | 258 | IPR014002 | - | |
| Pte15g02003 | 1282 | CDD | Tudor_Agenet_AtDUF_rpt1_3 | 114 | 194 | - | - | |
| Pte15g02003 | 1282 | MobiDBLite | consensus disorder prediction | 1248 | 1282 | - | - | |
| Pte15g02003 | 1282 | PANTHER | PHD FINGER PROTEIN 12 | 636 | 1251 | IPR042163 | GO:0003714|GO:0045892 | |
| Pte15g02003 | 1282 | Pfam | Tify domain binding domain | 856 | 907 | IPR032308 | - | |
| Pte15g02003 | 1282 | SUPERFAMILY | FYVE/PHD zinc finger | 923 | 982 | IPR011011 | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte15g02003 | - | - | pcin:129318355 | 909.442 |
Showing 1 to 1 of 1 entries