Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01992 ATGGATCCACACATCAGAGGACAAGGAGGCATTCAGATGCTACTTACAGCTGAGCAAGATGCTCAGCAAATCGTTTCCAATGCAAGAAACTTGAAGATAAAAAGACTGAAGCAAGCCAAGGAAGAAGCAGAAAAGGAACTGCTACTATACCGCTCTCAAATGGAAGCTGAATACCAAAAGCAAATTGCTGAGTCTACTGGGAGCTCAGGAGACAATGTAAAGAGGCTTGAGGCTGAAACAGAAGCAAGAATTAAGAAGTTAAAAGAATGTACATCCAAAGTCCAAACTCAGATCATTGAAATGCTTATTAAGTATGTAACTACAGTGAGAACCTAA 336 0.4018 MDPHIRGQGGIQMLLTAEQDAQQIVSNARNLKIKRLKQAKEEAEKELLLYRSQMEAEYQKQIAESTGSSGDNVKRLEAETEARIKKLKECTSKVQTQIIEMLIKYVTTVRT* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01992 111 Pfam Vacuolar (H+)-ATPase G subunit 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte15g01992 111 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 6 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte15g01992 111 FunFam V-type proton ATPase subunit G 4 111 - -
Pte15g01992 111 Gene3D - 3 111 - -
Pte15g01992 111 NCBIfam V-type ATPase subunit G 9 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pte15g01992 111 Coils Coil 26 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01992 Pte-Chr15 26795765 26796380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01992 9 112 Primary Pumps ATPases(2) AT4G23710 49.038 4.99e-29 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01992 K02152 - qsa:O6P43_026956 138.272