Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01974 ATGCTGACAAGCAATCATACTAGTGAGTCAGAACTGACTCAGGCTGGCAAACGGTTATTTATGGATAATGGTGATGAGGAAAAACTCATGCAATTGTGCAGAGTCATGGAAGCTAATGAATCCAATTTCAGTCTTCAACCGCTTAGAGATGAGATGAATGGTTCATGTGGGAAAATCAATCAAGAAGTTATGTCTCAGTTTGGGACAACAGAGACGGGATTGTCAAATGTGACTGAGGCATCTGTGCAACCATTGACATTTACTAAACTGGACAATGGTAGACTACTGTTGGAGAACAAGGATTTCCTGGAATCACCTGCCCCACCATCTCTAACTATGTCCTTGGGTGGACCACAGGGAAGCACCTTGCTGCCTTTGAACGGTGGGGTTGTAGAAGGAAAAGATCAAGGCAAAGCATCTCTTCTTTTTTCTCCAGGGCAACGAGTTCGACCTATATTGCCCAAACCTTCGAAGACTTACGATACAAACAAAGCATCAAATTCTCAGATGCGCATTGCTCGCCCTCCTGCTGAGGGACGCGGGAAGAATCAATTACTTCCTCGATACTGGCCCAGAATTACTGACCTTGAACTGGAGCAATTAGCTGGAGATTTGAATTCCACTGTAGTTCCATTGTTTGAGAAGCAGCTGAGTGCAAGTGATGCTGGTAGAATAGGACGTTTGGTTCTCCCAAAAGCTTGTGCAGAAGCATATTTTCCCCCTATCAATCAATCAGATGGAGTTCCTTTGAGGATGCAAGATGTGAAAGGAAATGAATGGACTTTTCAGTTTAGATTTTGGCCTAACAACAACAGCAGGATGTACGTTTTAGAGGGTGTAACTCCTTGCATACAGAATATGCAGTTAAAAGCCGGTGATACTGTAACATTTAGCCGCGTGGATCCAGGAGGCAAACTAGTCATGGGTTTTAGGAAGGCATCGAACTTAGAGGATACCCAGGATGCATCAGCATCTACCGATATCGATGGCACATATTCTAAAGAAAACATCTTTACTGGAGCAAATGAGAATCATCCATCAAGAAGCCACTCTGATGATCTTTCACCAGTGAAGGGAAGCAAAGAGACTCACTTAAATGCCCCATCAGAACATGTCCATTTGGCCAATGGTGATGCTGACCTGCCTGAGAGTTACAATCATGAGGGTGTGACTAATAATAGACCACTAAAGCAGCTGGTTACAGGTTCAGAAAAGAGGACCAGGAACATTGGGCCTAAAAACAAGCGGCTGCACATCCATAGTGAAGATGCTCAGGAGCTAACAATTACATGGGAAGAAGCACAGGACTTGCTTTGTCCACCACCAAGTGCCAAACTGAGCATTGTGACAATTGAGGACCACGTTTTTGAAGAATATGATGTGGCACCTATCTTGGCCAAGAAAACCGTGTTTTCAGCTCGACCTACTGGGGGTCAAGACCAATGGGCTCAATGTGATAACTGCCACAAATGGCGAAAGCTGCCAGTGGATGTACTTGTTCCCCTGAAGTGGACGTGTTCTGAAAATATCTGGAATGCAAGCAGGTCTGATTGTTCAGCACCAGAGCAGTTGACTCCCAAAGAAATGGAGAATTTTTCAAGAACCAGCAGAGAATTTAAGAAGCGAAGAACTTCAGCAAGTAACAAATCTGCAGGTGAGCAGCGTGAACCTACAGGCTTAGATGCTCTAGCAAGTGCTGCAGTGATGGGAGAAAATGTGGGCGAACCATCTGCTGGAGCAACTACTCGACATCCCCGACACCGCCCTGGCTGCACCTGCATTGTGTGCATACAGCCCCCAAGCGGTAAGGGTAAGCATAAGCCGAATTGTACTTGCAATGTGTGCTTGACTGTAAAACGCCGGTTTAGAACCCTCATGCTGAGAAAGAAGAAACGCCAATTGGATCGTGAAGCAGAAGCTGCACAGGAGAATCACAATCAAAATCAGAGATATGAGAGCGAGGCAAATGTCAACACAGCTAGAGATTTGCTGTCACAGACACAGGCAGCTGATTCGGGGAAGAAGCAAAGGACTACAAACAGAAACCAAACTGGCGTAATGCCGGGGGCTTCTGCAGGAGGGAACATAGACTTGAATTGTGATCCTAACCGTGAAGACAATCAAGTGGAGGACTCCATGAAGAACGGTACAAGCAGCTTTCTACCTGCCCGGCAGGATAACAGAATGTCCAGTTTTCTCCAACAGTCCACCAGAGAAGGTCAGAGTCATGTGACTGACGTACCTGTCATCTGGAGTCGTGTACACAGGGGGGGTGATGATCATCAAGGGAAAGATTCAAACGGGCATGAACTTTCTTAG 2319 0.4584 MLTSNHTSESELTQAGKRLFMDNGDEEKLMQLCRVMEANESNFSLQPLRDEMNGSCGKINQEVMSQFGTTETGLSNVTEASVQPLTFTKLDNGRLLLENKDFLESPAPPSLTMSLGGPQGSTLLPLNGGVVEGKDQGKASLLFSPGQRVRPILPKPSKTYDTNKASNSQMRIARPPAEGRGKNQLLPRYWPRITDLELEQLAGDLNSTVVPLFEKQLSASDAGRIGRLVLPKACAEAYFPPINQSDGVPLRMQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQNMQLKAGDTVTFSRVDPGGKLVMGFRKASNLEDTQDASASTDIDGTYSKENIFTGANENHPSRSHSDDLSPVKGSKETHLNAPSEHVHLANGDADLPESYNHEGVTNNRPLKQLVTGSEKRTRNIGPKNKRLHIHSEDAQELTITWEEAQDLLCPPPSAKLSIVTIEDHVFEEYDVAPILAKKTVFSARPTGGQDQWAQCDNCHKWRKLPVDVLVPLKWTCSENIWNASRSDCSAPEQLTPKEMENFSRTSREFKKRRTSASNKSAGEQREPTGLDALASAAVMGENVGEPSAGATTRHPRHRPGCTCIVCIQPPSGKGKHKPNCTCNVCLTVKRRFRTLMLRKKKRQLDREAEAAQENHNQNQRYESEANVNTARDLLSQTQAADSGKKQRTTNRNQTGVMPGASAGGNIDLNCDPNREDNQVEDSMKNGTSSFLPARQDNRMSSFLQQSTREGQSHVTDVPVIWSRVHRGGDDHQGKDSNGHELS* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01974 772 FunFam B3 domain-containing transcription repressor VAL1 191 318 - -
Pte15g01974 772 Coils Coil 624 654 - -
Pte15g01974 772 Gene3D - 191 317 IPR015300 -
Pte15g01974 772 MobiDBLite consensus disorder prediction 346 364 - -
Pte15g01974 772 MobiDBLite consensus disorder prediction 633 655 - -
Pte15g01974 772 MobiDBLite consensus disorder prediction 531 549 - -
Pte15g01974 772 Gene3D - 472 525 - -
Pte15g01974 772 MobiDBLite consensus disorder prediction 667 689 - -
Pte15g01974 772 MobiDBLite consensus disorder prediction 337 364 - -
Pte15g01974 772 Pfam B3 DNA binding domain 213 312 IPR003340 GO:0003677
Pte15g01974 772 SMART B3_2 213 314 IPR003340 GO:0003677
Pte15g01974 772 Pfam CW-type Zinc Finger 481 523 IPR011124 GO:0008270
Pte15g01974 772 MobiDBLite consensus disorder prediction 667 725 - -
Pte15g01974 772 CDD B3_DNA 211 312 IPR003340 GO:0003677
Pte15g01974 772 ProSiteProfiles B3 DNA-binding domain profile. 213 314 IPR003340 GO:0003677
Pte15g01974 772 MobiDBLite consensus disorder prediction 517 558 - -
Pte15g01974 772 ProSiteProfiles Zinc finger CW-type profile. 476 526 IPR011124 GO:0008270
Pte15g01974 772 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 19 723 - -
Pte15g01974 772 SUPERFAMILY DNA-binding pseudobarrel domain 211 312 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01974 Pte-Chr15 26084411 26088457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01974 152 661 B3 DNA Binding Superfamily AT2G30470 55.939 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte15g01974 B3 1.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01974 K09287 - qsa:O6P43_014159 893.649