Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01972 ATGAAATTTTTTGTTCTTTCAATGGATAACGTGATGTTATCGCCGTCCTCGCTGATGAGGAGTTCGTTAGAAGAAATGTTGGAGTCGCTTCATCGAAGAGATGAAGAAGAGAAGCCAAAGGACTTGCCACCGGCATTGCCAACTAGGCCAAATTCTAAAGCTCGGTTACCGTCGACAAGGAGGGTGTTGCCGGATGAGTTGAAAGTTGGTGATAGTGATTCTGGGATTGGAAATAGGAGCTCAAAGAGTGGTGGTAGCGGTAACGGAGAGAGTAGCAAGAGAAAGGAGAAAGGCTTAGGTATGAAGAGAGGAACTTTTGGAGAAAAAAAGTCGAAGAAGGACCCTGAATCACCTTATGTTATCACGACAACAACAGAGAACGATAAGAGTGACCATTCAACGGCTTCTTCTAAACCTGAGTCATTGCAGAAGGTTGGAGAGTCGGAATGGGATGATGATATTGGTTATTTCATGAAAAAGAAACTTCGTGTTTGGTGTAGGCGACCCAGTGGAAATTGGGGATTAGGAACAATACAGTCGACATTGGGTGAGGAAGCTTCTGTTTCTCTTTCTAATGGCAATGTGATGAACGTGAAGACCGGACAGCTATATCCCGCTAACCCAGAAATTCTGGAGGGCGTTGATGATCTCATACAGCTTAGTTATTTGAATGAGCCTTCAGTACTTCAGAACCTTCGGTTTAGATACTCCCGAGATATGATTTATACCAAAGCAGGGCCTGTTTTGATAGCGTTGAATCCCTTCAAAGATCTTCAATTATACAAAAATGATCATATTTCAGCCTACAGACAGAAACTGTCAGATACTCCACATGTTTATGCAATAGCGGATACAGCTTATACTGAGATGGTGAGAGTGTATCCCCTTTACAGTGGTGAAAGTGGGGCTGGGAAGACAGAGACAGCAAAAATCACGATGCATTACTTAGCTACTCTCGGTGGTGGTAGTGGTGGGATTGAAAATGATATTCTTCAGACAAATTATATACTGGAAGCCTTTGGGAATGCGAAAACATCTCGTAATGATAACTCAAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACCCTGGGGAAGATATGTGGTGCTAAAATTCAAACCTTTCTGTTAGAAAAGTCTAGAGTAGTTCAACTGGCCAATGGTGAGAGGTCATATCACATATTTTATCAACTCTGCGCTGGAGCTTCGGCAGTTCTTAAAGAGAGGCTGAACCTTAGAATGGCCAGTGAATATAATTACCTCAATCAGAGTGAGTGCATAAAAATCGGCGGTGTTGATGATTCTGAAAAATTCCGTAAAGTCGTGAGATCACTGAATGTTGTCCGAATATGCAAAGATAAGCAAGATTGTTTATTTGAGGTGCTTGCTGCTATATTATGGCTCGGAAACATATCATTCAAAGTAGTCGAAAATGAACATGATGTCGAGGTCATAGCTGATGAAGCTGTGATTAATGCTGCAAAACTCATGGGTTGCAGTTCCCAGGAGCTGATGGTAGCTTTATCTACTCATAAAATTCAATGTGGAAAGGACATGATTTCCAAAAAATTGACACTGAGACAGGGAAGTGATACTAGAGATGCTTTGGCAAAATTTATGTATGCAAGCTTGTTCAACTGGCTTGTAGAACAAATTAACAACTCTCTGGAAGTGGGTAAACAATGTACAGGGAGGTCCGTAAGCATTCTTGACATATATGGCTTTGAATCATTTAAGAGGAATAGCTTTGAACAGTTCTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTTTTTAAACTTGAGCAAGAGGATTACGAATTGGATGGAATTGATTGGACAAAAGTCCATTTTGAAGACAATCAGGAATGCCTCGACTTATTTGAAAAGAAACCTTTAGGGCTACTCTCTTTGCTTGATGAGGAGTCAAATTTCCCTAGGGCCACTGATTTGACATTTGCCAATAAGCTTAAGCAGCATTTGCTTACTAATACTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTCCGCGTTTGCCATTATGCAGGAGAGGTACTCTATGATACAAATGGGTTTCTTGAAAAGAACAGAGATCCCTTGCATTCTGATTCTATTCGACTCCTTGTGTCATGCAATTCTCAGCTGCTGAAGTTGTCTGCCACCAAAATGGTTCAGCATATGGGTGCACTGGACAGACAGAAGCAGAGTGTTGGTATCAAGTTCAAGGGTCAATTGTTCAACTTAATGAATCAGTTGGAAAACACGACTCCTCACTTTATTCGATGCATAAAGCCTAATAGCAAGCATCTCCCCAGAGCATATGATGAACAACTTGTCTTACAGCAGCTTAGATGTTGTGGAGTTGTGGATGTGGTTAGGACTTCAAGATCTGGATATCCTACGAGGATGACTCATCAAGAGTTTGCAGAAAGGTACGGGTTACTATTTGCTGAGGCTAATTTATCAAATGATCCATTAAGCATTTCAGTTGCGGTTCTGCAACACTTCAATGTACAACCAGAAATGTACCAAGTTGGTTTTACGAAAGTGTATCTCAGGGCAGGGCAGATTGGCACTCTGGAGAATAGAAGAAAACAAGTTGTTCTTGGTGTACTTGGTATCCAGAAACAATTCCGTCGTCACAAGGCTAGTCGACGTTTGCAAGATCTGAGGAATGGCGCATTGGTATTGCAATCATTTGTCCGTGGAGAAATTGCAAGAAAGAAATATAGTGCCATGGCCACCAGTTCTTTGCCTTGTCAGACAGAAGAGGAGCTCCAGGCGATCATTCAATTACAATCTGTATTCCGCGGATGGCTTGTTCGCAGGAATGCCAGCACCCTTAGTAACAATAAAGGAAGTCCAGAAAGTGCAAAATTTAAGCGTGAGGCATATGGCGAAGTCTCAGAAGTGAAGCAGGACTTATCAAAAGAGAAGAATCTGCCTTCAGATGTAGCAGAGCTCCAAAAACGAGTTCTAAAGGCAGAATCTGCTCTGGAGAAAAAAGAAGAGGAAAACGCTGCTCTACGGGAACAACTTAAACAGTTTGAGAAGAGGTGGATTGATTATGAGATGAAGATGAAATCAATGGAGGAGATGTGGCAGAGGCAGATGTCATCTTTACAAATGAATCTTGCTGCTGCTAGGAAGAGCCTTGCTGCTGAGGACAATGCTGGTGTACAACATGCAAGGCTTGATTGTTCATCAGTTTGTAGCTATGATTCTGAGGATGTGACTGCCATGGAATCTTGCAATCCAAGTGCAAGTAAACCTAATGATTCTGGTCGACGAGACGCTAATCGTTCACTGAATGCTGTCAGTAGTCTGGCAAAGGAATTTGACCGCTACAGACAGACATTTGATGATGAAGCCAAATTTCTAGGTGAGATCCAAACAAGGAAGCCTGCTAATATTAATTCAGAAGAACTTAGGAAACTTAAATATAGATTTGAGGCGTGGAAGAAAGATTACAAGGTTAGATTGCGGGAGACAAAGCTGAGGCTTCAAAAACTAGGTAATTCAGAAGTAGATAAAGGTCTCCGGAAGTGGTGGGGTAAATTAAGCACATGGATATCCAACTAA 3597 0.4165 MKFFVLSMDNVMLSPSSLMRSSLEEMLESLHRRDEEEKPKDLPPALPTRPNSKARLPSTRRVLPDELKVGDSDSGIGNRSSKSGGSGNGESSKRKEKGLGMKRGTFGEKKSKKDPESPYVITTTTENDKSDHSTASSKPESLQKVGESEWDDDIGYFMKKKLRVWCRRPSGNWGLGTIQSTLGEEASVSLSNGNVMNVKTGQLYPANPEILEGVDDLIQLSYLNEPSVLQNLRFRYSRDMIYTKAGPVLIALNPFKDLQLYKNDHISAYRQKLSDTPHVYAIADTAYTEMVRVYPLYSGESGAGKTETAKITMHYLATLGGGSGGIENDILQTNYILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKSRVVQLANGERSYHIFYQLCAGASAVLKERLNLRMASEYNYLNQSECIKIGGVDDSEKFRKVVRSLNVVRICKDKQDCLFEVLAAILWLGNISFKVVENEHDVEVIADEAVINAAKLMGCSSQELMVALSTHKIQCGKDMISKKLTLRQGSDTRDALAKFMYASLFNWLVEQINNSLEVGKQCTGRSVSILDIYGFESFKRNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVHFEDNQECLDLFEKKPLGLLSLLDEESNFPRATDLTFANKLKQHLLTNTCFKGERGRAFRVCHYAGEVLYDTNGFLEKNRDPLHSDSIRLLVSCNSQLLKLSATKMVQHMGALDRQKQSVGIKFKGQLFNLMNQLENTTPHFIRCIKPNSKHLPRAYDEQLVLQQLRCCGVVDVVRTSRSGYPTRMTHQEFAERYGLLFAEANLSNDPLSISVAVLQHFNVQPEMYQVGFTKVYLRAGQIGTLENRRKQVVLGVLGIQKQFRRHKASRRLQDLRNGALVLQSFVRGEIARKKYSAMATSSLPCQTEEELQAIIQLQSVFRGWLVRRNASTLSNNKGSPESAKFKREAYGEVSEVKQDLSKEKNLPSDVAELQKRVLKAESALEKKEEENAALREQLKQFEKRWIDYEMKMKSMEEMWQRQMSSLQMNLAAARKSLAAEDNAGVQHARLDCSSVCSYDSEDVTAMESCNPSASKPNDSGRRDANRSLNAVSSLAKEFDRYRQTFDDEAKFLGEIQTRKPANINSEELRKLKYRFEAWKKDYKVRLRETKLRLQKLGNSEVDKGLRKWWGKLSTWISN* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01972 1198 SMART iq_5 929 951 IPR000048 GO:0005515
Pte15g01972 1198 SMART iq_5 894 916 IPR000048 GO:0005515
Pte15g01972 1198 SMART iq_5 871 893 IPR000048 GO:0005515
Pte15g01972 1198 Pfam Myosin head (motor domain) 214 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 PANTHER MYOSIN 205 1175 - -
Pte15g01972 1198 CDD MYSc_Myo8 226 858 IPR036022 -
Pte15g01972 1198 Coils Coil 990 1024 - -
Pte15g01972 1198 SMART MYSc_2a 206 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 MobiDBLite consensus disorder prediction 117 143 - -
Pte15g01972 1198 ProSiteProfiles IQ motif profile. 895 924 IPR000048 GO:0005515
Pte15g01972 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 918 IPR027417 -
Pte15g01972 1198 PRINTS Myosin heavy chain signature 292 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 PRINTS Myosin heavy chain signature 335 362 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 PRINTS Myosin heavy chain signature 620 648 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 PRINTS Myosin heavy chain signature 242 261 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 159 208 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 Gene3D - 579 760 - -
Pte15g01972 1198 Gene3D - 804 871 - -
Pte15g01972 1198 Gene3D Kinesin motor domain 211 803 IPR036961 -
Pte15g01972 1198 MobiDBLite consensus disorder prediction 89 116 - -
Pte15g01972 1198 Pfam IQ calmodulin-binding motif 932 949 IPR000048 GO:0005515
Pte15g01972 1198 Pfam IQ calmodulin-binding motif 898 915 IPR000048 GO:0005515
Pte15g01972 1198 Gene3D - 876 922 - -
Pte15g01972 1198 MobiDBLite consensus disorder prediction 28 43 - -
Pte15g01972 1198 FunFam Unconventional myosin-XIX 579 760 - -
Pte15g01972 1198 FunFam Myosin heavy chain 391 447 - -
Pte15g01972 1198 MobiDBLite consensus disorder prediction 74 88 - -
Pte15g01972 1198 Gene3D Myosin VI head, motor domain, U50 subdomain 448 556 - -
Pte15g01972 1198 Gene3D - 391 447 - -
Pte15g01972 1198 MobiDBLite consensus disorder prediction 28 146 - -
Pte15g01972 1198 ProSiteProfiles Myosin motor domain profile. 212 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g01972 1198 ProSiteProfiles IQ motif profile. 930 959 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01972 Pte-Chr15 26027452 26040491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01972 14 1191 Myosins gene family AT5G54280 60.408 0.0 1463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01972 K10357 - qsa:O6P43_029040 1562.36