Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01971 ATGGCAGCAACAGTAAGCTCCAGCACTGTCCTTAGACCAACCCCTTTCCTCGGCCTAAGCAGGGGAACCAATTCCATTCCTCTTCGAGATGTTGCTGTCTCCGTGGGAACTGGGAGATACACAATGAGTAATCAACAATGGTATGGACCAGACAGAGTGAAATACTTGGGACCATTCTCAGCTCAGACTCCTTCGTATTTGACCGGAGAATTCCCTGGAGATTATGGATGGGATACTGCTGGATTATCTGCTGACCCAGAAGCATTTGCCAGGAACAGGGCTCTTGAGGTGATTCATGGGCGTTGGGCAATGCTTGGGGCACTTGGCTGCATCACCCCGGAAGTCCTTCAGAAATGGGTACGGGTAGACTTCAAAGAGCCAGTTTGGTTCAAAGCAGGAGCTCAAATTTTCTCGGAAGGAGGACTGGACTACTTGGGTAATCCCAACCTTGTTCACGCACAAAGCATCCTAGCAGTGTTAGGCTTCCAAGTTGTGCTTATGGGTCTTGTTGAAGGGTTCCGTATCAATGGCCTTCCTGGTGTAGGAGAGGGCAATGACCTCTACCCAGGTGGGCAATACTTTGATCCTCTTGGTCTTGCTGATGACCCTGTAACATTTGCAGAGCTCAAGGTAAAGGAAATCAAGAATGGCCGGCTAGCTATGTTCTCAATGTTCGGTTTCTTTGTTCAAGCCATTGTCACAGGAAAGGGACCATTGGAAAATTTATTGGATCACTTGGACAATCCTGTGGCAAACAATGCATGGGTATACGCCACCAAGTTTGTTCCCGGATCTTAA 798 0.4837 MAATVSSSTVLRPTPFLGLSRGTNSIPLRDVAVSVGTGRYTMSNQQWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01971 265 FunFam Chlorophyll a-b binding protein, chloroplastic 54 258 - -
Pte15g01971 265 SUPERFAMILY Chlorophyll a-b binding protein 46 262 - -
Pte15g01971 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 264 IPR001344 GO:0009765|GO:0016020
Pte15g01971 265 Gene3D Chlorophyll a/b binding protein domain 54 258 - -
Pte15g01971 265 Pfam Chlorophyll A-B binding protein 64 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01971 Pte-Chr15 26025431 26027630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01971 28 266 Chloroplast and Mitochondria Gene Families AT3G27690 72.470 6.95e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01971 K08914 - cave:132175650 515.383