Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01942 ATGAAACAGGAGTCCATTGGGTTGATTATTGGGATCTCCATTGGCGTAGTGGTTGGAATTGCTTTGGCAATTTCGGTATTGCTCTGCCTTAAGTTCCACAGAAAGCGTTCACAGATAGGTAATAGTAGTTCCAGGAGGGCAGCCACCATTCCCATCCGTACAAATGGTGCAGACTCTTGTACAATACTATCAGACTCTACAATTGGTCCTGAGTCACCCGTGAAATCCGGAAGAAATGGTGTCACTTGGCTCGAGGGATTTAAGAACAACAACATGATTCCGGCATCTGGAATACCTGAGTATTCACACAAGGATTTGCAGAAGGCAACATATAATTTTACAACATTGATTGGACATGGTGCATTTGGTCCGGTTTACAAAGCTCAACTTCCAACTGGTGAAACTGTAGCTGTTAAAGTTCTTGCTACTGATTCTAAGCAAGGAGAGAAAGAGTTCCAAACTGAGGTCATGTTATTGGGAAGGTTACATCATAGAAATCTTGTGAATTTGGTCGGATACTGTACAGAGAAAGGGCAGAATATGCTCGTGTATGTTTACATGAGCAACGGCAGCCTTGCATCTCATTTGTACAGCAATCCGGATGAAGAGCCATTGCACTGGGATTTAAGGGTTCAGATAGCTTTAGATGTAGCAAGGGGCTTGGAGTATCTTCATGACGGGGCCATTCCTCCTGTGATACATCGTGACATAAAATCTTCCAATATCTTGTTGGACCAGTCAATGCGAGCTCGGGTAGCTGATTTTGGCCTCTCAAGGGAGGAAATGGTGGACAAGCATGGGGCCAATATACGGGGTACTTTCGGTTATCTTGATCCTGAGTACATATCCACGCGATTGTTCACTAAGAAGAGTGATGTTTACAGTTTTGGAGTATTGCTCTTTGAACTAATAGCTGGCAGAAATCCTCAGCATGGTCTTTTGGAATATGTTGAGCTTGCAGCAATGAATACTGAAGGAAAAGTCGGTTGGGAAGAACTTGCGGATTCCCGTCTTGATGGGAAATTTGATTTTCAAGAGTTGAATGAAGTGGCAGCACTTGCATTCAAATGTATCAACCGTGTCCCAAGAAAACGGCCTTCCATGAGGGACATAGAGCAGGTGCTGAATCGGATACTTAAATTGAAGTACAGTAGAAGACATCACAAAAAATCACTATCTGCTACCTCAGATGAAGTTTCCGTCAGTATTGAGCAGGCAGATTCGAAGACTCCCAATCCTGAACATAGGAGAGAAGAATCTATTGATAGCACTGCTAATATATATGAAGTTTGA 1293 0.43 MKQESIGLIIGISIGVVVGIALAISVLLCLKFHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTIGPESPVKSGRNGVTWLEGFKNNNMIPASGIPEYSHKDLQKATYNFTTLIGHGAFGPVYKAQLPTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCTEKGQNMLVYVYMSNGSLASHLYSNPDEEPLHWDLRVQIALDVARGLEYLHDGAIPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHGANIRGTFGYLDPEYISTRLFTKKSDVYSFGVLLFELIAGRNPQHGLLEYVELAAMNTEGKVGWEELADSRLDGKFDFQELNEVAALAFKCINRVPRKRPSMRDIEQVLNRILKLKYSRRHHKKSLSATSDEVSVSIEQADSKTPNPEHRREESIDSTANIYEV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01942 430 CDD STKc_IRAK 117 378 - -
Pte15g01942 430 Gene3D Phosphorylase Kinase; domain 1 84 186 - -
Pte15g01942 430 SUPERFAMILY Protein kinase-like (PK-like) 101 385 IPR011009 -
Pte15g01942 430 MobiDBLite consensus disorder prediction 389 430 - -
Pte15g01942 430 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 85 186 - -
Pte15g01942 430 Pfam Protein tyrosine and serine/threonine kinase 113 374 IPR001245 GO:0004672|GO:0006468
Pte15g01942 430 FunFam calcium/calmodulin-regulated receptor-like kinase 1 187 397 - -
Pte15g01942 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Pte15g01942 430 Gene3D Transferase(Phosphotransferase) domain 1 187 402 - -
Pte15g01942 430 SMART serkin_6 111 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01942 430 MobiDBLite consensus disorder prediction 409 424 - -
Pte15g01942 430 ProSiteProfiles Protein kinase domain profile. 111 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01942 430 PANTHER OS01G0750732 PROTEIN 4 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01942 Pte-Chr15 25548886 25553168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01942 24 375 Glycoside Hydrolase AT3G07070 40.650 7.90e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pte15g01942 PK_Tyr_Ser-Thr 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01942 - - pvy:116107725 694.886