Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01939 ATGCCAACAGTGTGGTTCTCCTTGAAGAGGTCTCTATACTGCAAATCAGAACCTTCAGAAGTTCATGACCCCAGATCTAAAAAGCACTTGAGCACAATTTTGACCAGGAAGGCGGGAAGGTCAGGTTGTTCAAGGTCCATTGCAAACCTAAGAGATGTCATACATGGAAGTAAGAGACACATAGAAAAGCCTCCAAGTTGTAGCCCAAGATCTATAGGGAGCAGTGAGTTCCTAAACCCAATCACCCACGAAGTCATTTTGAGTAACTCAAGGTGTGAGTTGAAAATCACAGGCTTTGGAGGTTTCCATGAAGGGGTTGCCAGTGGCGGTGGCGGAGGAGGAGGTGGTAGCAGTAATGGTAATGAAAGTGGTGGTGGTTCAACATTTGTGGGTACTCTAAGGCCCGGTACGCCTGGACCAGGAGGGCACCCTACCATGCACTACTTCAACAGCTCTCATAGGTCCTCATCAACTCCTCCAAGAAAGTCTCCTTTTTTATTATCAGAGAGAGAAGGGTCTGGATTAGGTGGCTCTGCTTTTCATGGTGGCGGTGGAGGACTTCACCACTCAAGCAATAGGGCATCTCTTGATGCAGATTCACATGGCTGCTCAACTATGACTTGCCACAAATGTGGAGAGCAGTTTACCAAATGGGAAGCTGCTGAAGCACATCATCTCTCCAAGCATGCTGTTACTGAACTTGTTGAGGGAGATTCTTCAAGGAAAATAGTAGAGATAATATGCAGGGCTAGCTGGTTGAAGTCTGAGAACCACTATGGTCGGATTGAGAGAGTTCTAAAAGTCCACAACATGCAGAGAACTCTTGCCAGGTTTGAAGAGTACAGAGAAATGGTGAAAATTAAAGCTAGCAAACTCCGCAAGAAACATCCTAGGTGCCTTGCTGATGGAAATGAACTTTTAAGGTTTTATGGCACAACAGTTGCCTGCTCTCTCGGTCTTAGTGGTTCCTCTAGTCTTTGCCTATCTGAAAAATGTTCTGTTTGTAGGATCATTAGAAATGGGTTTTCTACAAAGAAAGAGTTGAAGGGTGGAATAGGTGTTTTCACCACTTCAACAAGTGGAAGAGCTTTTGAGTGCATTGAAGTTGGTGACGATGACCCATCTATAAGAAAAGCATTAATCGTGTGCAGAGTAATTGCTGGCAGGGTTCATAGACCACTAGAGAACATTCAAGAGATGGTAGGACAGACTGGTTTTGATTCATTGGCTGGTAAAGTTGGTTTGTATTCAAATATCGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTACTACCTTGCTTTGTTGTAATTTGCAAAACATGA 1323 0.4422 MPTVWFSLKRSLYCKSEPSEVHDPRSKKHLSTILTRKAGRSGCSRSIANLRDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFHEGVASGGGGGGGGSSNGNESGGGSTFVGTLRPGTPGPGGHPTMHYFNSSHRSSSTPPRKSPFLLSEREGSGLGGSAFHGGGGGLHHSSNRASLDADSHGCSTMTCHKCGEQFTKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRASWLKSENHYGRIERVLKVHNMQRTLARFEEYREMVKIKASKLRKKHPRCLADGNELLRFYGTTVACSLGLSGSSSLCLSEKCSVCRIIRNGFSTKKELKGGIGVFTTSTSGRAFECIEVGDDDPSIRKALIVCRVIAGRVHRPLENIQEMVGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKT* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01939 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 438 - -
Pte15g01939 440 ProSitePatterns Zinc finger C2H2 type domain signature. 208 229 IPR013087 -
Pte15g01939 440 MobiDBLite consensus disorder prediction 148 163 - -
Pte15g01939 440 MobiDBLite consensus disorder prediction 114 130 - -
Pte15g01939 440 SUPERFAMILY ADP-ribosylation 231 439 - -
Pte15g01939 440 Gene3D - 221 440 - -
Pte15g01939 440 FunFam C2H2-like zinc finger protein 230 439 - -
Pte15g01939 440 MobiDBLite consensus disorder prediction 110 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01939 Pte-Chr15 25533310 25536117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01939 1 439 C2H2 Transcription Factor Family AT5G54630 65.605 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte15g01939 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01939 - - jre:109014337 694.501