Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01937 ATGGCAATACTTCAGCATATGGGTGTCATAAAAATTGGTTTTCTCATTACTATGGTTGTACTTCTCAAGGTAGCAGTTCGTGCACAAGAGCGGAAGATTTCAGAGGAAGAGTTTCTTAGCCAACTACTTGATCCGGCATCTGGATTACTGGGTGCGGAAGAGGCAGAAAAAATTTGGGATAGTTGCAGGCTAGAATTAATTGGTTTGAAGGAAGAGATTGAAAATCTCGAGTCATGCTTTTCTCCAGACTCATGCAGTGCTACCAAGGATAATTCAAACTTTCATTCATTATCTAGACAAAATATTCAAAAAGTTTTAGCTTTTGGCTATCCGCAATCAAAGCAAAATCTTGTCAACTGTATAAGAATGAATAACCTACCATTTCCAGTCTCTGGAGAAGATGTGGGCTCTGAGATTGCTCATGCTGGGTATCTTAAATCCCTGCTTTTCAGCCCTGATGTTCGTAGAAGAATCTTGAGCCGAGATCTGCTACAGAGCATACCAGCAGGCCCGCCAGCGGTGGCAGAGGCACCTAGCGGATCACCTATGTTAGCGATGGCACCATCTCCTGATTTTCCGGCATCTGCTTCATCTCGACCTCATGGCTCCAGGAGCCCTGCTGCTGCACCATTCTTTCGTGACCTCGGCCAATCAAATCAACCACAATCATCTGAGAAAACTGCTTCAGTTGATTCTAGTTCACGAGCAAAGAAGGAGGCTAATAGCAGCAAAACTGTTGTTATTGCTGTGGTTGTTACAGCAGTAGTTACGCTTATTGTGGCAGCGCTGGTATTTCTGTGCTACATGAGGTTTTGTAGAATACGTGCTCTAGCTGGACAAAATGATCAGAGGCCCTTACTCAGCATGAGTATGAGTGACTTCTCTGTTGGTGCTTCAAGTTATTCTGTGGATTCGGTTAAAGAAGACCGGCAATCATTCTCAATTCAACAGAAGCTTGCATCTGTAGAACGCAAAACCACAGATCTTGATACTATACAGGAAAGTCAATTGTTAGGTGGGAAATCAGCCTCTGAATCTGATAGAGCTGAGACCTTGAATGGACAGGCGTTTCCTCCTCTGCAACCTCCCCCTGGGAAGTTGCTGAGCACACCATCTGTAATGGGTTCACTGAAGCCACCTCCTGGCAGGCCTGCTCCCCTTCCTCCAGAACCTCCATCTTTTAAACTTTCCAACGCTAATGCAGGTTCACCTCCACCTCCGCCTCCTCCACCGCGTCCCACCACAAGGCCTAGTCCTCCTATTGGCGGCCCTCCACCTCCTCGACCTCCTCCACCGCCTGCACCTTCTGGTGTGAAAAGTGGTCCTCGCCCACCAGGGCCACCACCACCTCCCAAGATTGGCAGTGGTCCCCCTCGACCACCTCCACCATTGGCCACTGGATCAAAGGTAGCTCGGCCTCCCAGTAACAGACCAAATGCTCCTGTAAATTTAGGGGCTGCTGTGGGAGGTAACAAAACCAAACTAAAGCCGTTTTTCTGGGATAAAGTTCAGGCCAATCCCGATCATTCAATGGTTTGGAATCAAATTAAATCAGGATCATTTCAGTTCAATGAGGAAATGATAGAAACTCTTTTTGGGTACTCAGCTAATGACAAAAGCAAAGGTAGCGGAAACAAGAAAGACTCTTCTTCCAAAGAACGTAGTGCACCACAGTTTGTCCAGCTCATTGATTCAAAGAAAGCACAAAATCTATCAATTTTACTGCGAGCACTGAACGTGACAATAGAAGAAGTTCGTGATGCACTTCTTGAAGGAAATGAGCTCCCTGCAGAATTCATTCAGACATTGTTAAAAATGGCACCGACATCGGAGGAAGAACTTAAGCTTAGACTTTACAATGGTGAATTATCACTTCTAGGACCTGCTGAACGCTTTCTAAAAGCCTTGGTGGATATTCCTTTTGCCTTTAAACGTCTGGAAGCATTGCTTTTTATGTGTAGTCTTGAAGAGGAGGTTACCAGTTGTAAGGAGTCATTTGCAACATTAGAGGTTGCCTGTAATGAGTTGAGAAGCAGCAGATTGTTCCTCAAACTTCTAGAAGCAGTTCTTAAAACTGGTAACCGCATGAATGATGGCACTTTCCGTGGTGGTGCTCAAGCATTCAAACTTGACACGTTGTTGAAGTTATCTGATGTAAAAGGAATAGATGGCAAGACAACACTTCTAAACTTTGTAGTTAAGGAGATAATGCGAACTGAAGGTCTGAAAGCTCTTAAAGCAGCTAGAGATAACCGGAGCTTCTCTAGTATCAAATCGGAGGATGTAGTTGCGGAAGCCACACAAGACACAGAAGAGCAATTTCAAAGCGTAGGTCTGCGTGTGGTTTCGAGGTTGAGTACTGAACTTGAGGGTGTGAAGAAAGCAGCAGTTATAGATGCCGACAACTTAACAGGAACTGTTGCCAGACTCGGACATTCACTTATAAAAACTAGAGACTTCTTGAACAAGGAAGTGAAGGAAACGGGGGAAGACAACAGCTTCTATCAAATTCTACGAGATTTTCTGCAGAATTCTGAGGTTGAGGTCAAAGCCCTGCTAGAGGAAGAGAATAGAATCATGGAGTTGGTGAAGAGTACAGGTGATTATTTCCACGGCAAGTCTGGGAAGGATGAGGGGTTACGCTTGTTTACGGTTGTGCGTGACTTCTTGGTAATGATAGATAAGGTATGCAAAGAAATTAAAGACGCACAGTCACAGAAGAAGCCAGTCCAAGCACAGAAACAGGAGACTGCTAAAGCTCCATCTTCCTCTGATAAGCAACAACCTTCTCCTGATCTTCATCAAAAATTATTTCCTGCAATAAGAGATAGACGGGCAGAAAGTTCTAGTTCTGATGACGAAAGTTAA 2868 0.4467 MAILQHMGVIKIGFLITMVVLLKVAVRAQERKISEEEFLSQLLDPASGLLGAEEAEKIWDSCRLELIGLKEEIENLESCFSPDSCSATKDNSNFHSLSRQNIQKVLAFGYPQSKQNLVNCIRMNNLPFPVSGEDVGSEIAHAGYLKSLLFSPDVRRRILSRDLLQSIPAGPPAVAEAPSGSPMLAMAPSPDFPASASSRPHGSRSPAAAPFFRDLGQSNQPQSSEKTASVDSSSRAKKEANSSKTVVIAVVVTAVVTLIVAALVFLCYMRFCRIRALAGQNDQRPLLSMSMSDFSVGASSYSVDSVKEDRQSFSIQQKLASVERKTTDLDTIQESQLLGGKSASESDRAETLNGQAFPPLQPPPGKLLSTPSVMGSLKPPPGRPAPLPPEPPSFKLSNANAGSPPPPPPPPRPTTRPSPPIGGPPPPRPPPPPAPSGVKSGPRPPGPPPPPKIGSGPPRPPPPLATGSKVARPPSNRPNAPVNLGAAVGGNKTKLKPFFWDKVQANPDHSMVWNQIKSGSFQFNEEMIETLFGYSANDKSKGSGNKKDSSSKERSAPQFVQLIDSKKAQNLSILLRALNVTIEEVRDALLEGNELPAEFIQTLLKMAPTSEEELKLRLYNGELSLLGPAERFLKALVDIPFAFKRLEALLFMCSLEEEVTSCKESFATLEVACNELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGIDGKTTLLNFVVKEIMRTEGLKALKAARDNRSFSSIKSEDVVAEATQDTEEQFQSVGLRVVSRLSTELEGVKKAAVIDADNLTGTVARLGHSLIKTRDFLNKEVKETGEDNSFYQILRDFLQNSEVEVKALLEEENRIMELVKSTGDYFHGKSGKDEGLRLFTVVRDFLVMIDKVCKEIKDAQSQKKPVQAQKQETAKAPSSSDKQQPSPDLHQKLFPAIRDRRAESSSSDDES* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01937 955 MobiDBLite consensus disorder prediction 401 468 - -
Pte15g01937 955 ProSiteProfiles Formin homology-2 (FH2) domain profile. 485 919 IPR015425 -
Pte15g01937 955 MobiDBLite consensus disorder prediction 937 955 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 333 488 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 535 556 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 170 236 - -
Pte15g01937 955 PRINTS Proline rich extensin signature 369 381 - -
Pte15g01937 955 PRINTS Proline rich extensin signature 408 420 - -
Pte15g01937 955 PRINTS Proline rich extensin signature 384 400 - -
Pte15g01937 955 PRINTS Proline rich extensin signature 445 461 - -
Pte15g01937 955 PRINTS Proline rich extensin signature 424 445 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 906 931 - -
Pte15g01937 955 SMART it6_source 485 908 IPR015425 -
Pte15g01937 955 MobiDBLite consensus disorder prediction 904 955 - -
Pte15g01937 955 SUPERFAMILY Formin homology 2 domain (FH2 domain) 498 909 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 377 393 - -
Pte15g01937 955 Pfam Formin Homology 2 Domain 491 892 IPR015425 -
Pte15g01937 955 MobiDBLite consensus disorder prediction 215 236 - -
Pte15g01937 955 MobiDBLite consensus disorder prediction 333 351 - -
Pte15g01937 955 Gene3D Formin, FH2 domain 491 930 IPR042201 -
Pte15g01937 955 PANTHER FORMIN-RELATED 162 952 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01937 Pte-Chr15 25504903 25511387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01937 464 947 FH2 protein (formin) Gene Family AT5G54650 66.119 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01937 - - cave:132174953 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01937 15 25504903 25511387 Pte15g01937 15 25504903 25511387 RCT