Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01927 ATGCCAATCCCACGTTACACGACAGTGCCACTCGCCGCATTGTACCTCCACGTGGCCATTAATCTCCAGCAAACGCCACACGAGGCGCGGTCTCCTTTCATCAACCTGATTCCCCAAATCAAGCTTTTGATAGAAACCCTAATTTTTGGATCAGGACTGAGCATTCGGGTTTTCGAACCTCTCTCAAGCGAACAAAGTTTCATGTCTGAACTCGAAGCCCAGATTCCTACTACCTTTGATCCGTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCTGGGACTAAGGAATATGTGCATATCCGAATTCAGCAGCGAAATGGTAGGAAAAGTCTGACTACTGTCCAGGGGTTGAAGAAAGAATACAGCTACAATAAAATACTCAAAGATCTCAAGAAAGAGTTCTGCTGCAATGGTACAGTTGTCCAGGACCCAGAATTAGGACAGGTCATCCAACTCCAAGGTGATCAGAGGAAGAATGCTTCTACTTTCCTTGTCCAGGCTGGAATCGTTAAGAAGGAGCATATCAAGATACATGGTTTCTGA 543 0.4604 MPIPRYTTVPLAALYLHVAINLQQTPHEARSPFINLIPQIKLLIETLIFGSGLSIRVFEPLSSEQSFMSELEAQIPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLVQAGIVKKEHIKIHGF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01927 180 FunFam Eukaryotic translation initiation factor SUI1 69 180 - -
Pte15g01927 180 Gene3D - 60 180 - -
Pte15g01927 180 SUPERFAMILY eIF1-like 65 180 IPR036877 GO:0003743|GO:0006413
Pte15g01927 180 ProSiteProfiles Translation initiation factor SUI1 family profile. 98 168 IPR001950 GO:0003743|GO:0006413
Pte15g01927 180 CDD eIF1_SUI1 96 179 IPR005874 GO:0003743
Pte15g01927 180 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 73 180 - -
Pte15g01927 180 NCBIfam translation initiation factor SUI1 73 180 IPR005874 GO:0003743
Pte15g01927 180 Pfam Translation initiation factor SUI1 95 169 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01927 Pte-Chr15 25288492 25290820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01927 68 181 Eukaryotic Initiation Factors Gene Family AT4G27130 89.474 2.72e-75 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01927 K03113 - qsa:O6P43_000848 230.335