Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01922 ATGGCTAGTTTTGGAAAAATCGGTTGTTTGTTGTATGACACATTTATTGACGGTACGAGTGCAGAATTTCATGTACCTACTCCACTTGTTTCTTCGAGAGAGAGTTACTTTGCAAGATACTGTAGACAGCTTTCACATGCTATATGGGGAGTTGTTGATGTATCACTGAAAAATGCTGCCTTGCCCATCTATAAAATTCAGACGAAGGTCATCAGGGTGTTTGATCCAGGACTTATCAAACGGAATGTCCAAGTACTAATACCTCAAGCTGGAAGGACTAGCCTACTGAAGCATGCAGAGAGAATGATGAGAAATTTTTGCATTGATGTTCGTGGTGCTACGTCGAACACATGGATGCAGCTACCAGTTTCTGGTGCAGAAAATGTGAGGGTCATGACAAAGAATAACTTCAGTGATCTTGGCAAAACCTCCTGGAGTAACAATAGCCTTTGCTGCTTCTCTTTGGCTTCCGGTCTCTCCTACAAAATGCAAGAAATAGCGTACATCATCAATGGCACTGACTCAAGAAATCGTGTTTCAAAATTGCAAGTAAATGCTGCTCGAAAAAAGATTGAAATCTTGTACCTGCAACAGAGTTATACAAATTCAACAGGCTCTTATGTTGTTTATGCTCCAATTGATTTCCACTCTATGTCTGTACTATTGGGTGGAGGAGACCCAGAACGTATGGCCATCCTTCCTTCAGGATTTGCAATATTACCTGATTGCTCAATTTCAAAGAGAGAAGACGACCCAGGAGGAACCCTTCTGACCATTGCATGTCACATAATCGACAGTGCATCCACTGGGGATTGTGTGCCAGCTGAGTCAGTGCTGACTGTTCACAAGATAATGTCAGAAATGGTTGTCTCAATAAAGGCTGCTGTCTTGAGTAACGACGTACAATAA 909 0.4191 MASFGKIGCLLYDTFIDGTSAEFHVPTPLVSSRESYFARYCRQLSHAIWGVVDVSLKNAALPIYKIQTKVIRVFDPGLIKRNVQVLIPQAGRTSLLKHAERMMRNFCIDVRGATSNTWMQLPVSGAENVRVMTKNNFSDLGKTSWSNNSLCCFSLASGLSYKMQEIAYIINGTDSRNRVSKLQVNAARKKIEILYLQQSYTNSTGSYVVYAPIDFHSMSVLLGGGDPERMAILPSGFAILPDCSISKREDDPGGTLLTIACHIIDSASTGDCVPAESVLTVHKIMSEMVVSIKAAVLSNDVQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01922 302 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 20 58 IPR042160 -
Pte15g01922 302 Pfam START domain 14 72 IPR002913 GO:0008289
Pte15g01922 302 SUPERFAMILY Bet v1-like 22 74 - -
Pte15g01922 302 SUPERFAMILY Bet v1-like 91 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01922 Pte-Chr15 25228915 25245807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01922 12 296 Homeobox Transcription Factor Family AT4G04890 32.723 3.66e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01922 K09338 - zju:112490642 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01922 15 25228915 25245807 Pte9g01327 9 34677600 34681100 RCT
Pte15g01922 15 25228915 25245807 Pte15g01922 15 25228915 25245807 RCT