Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01912 ATGGAATCGGTAGAAGAGAATATGAGCGAGAGCATTGATATATCAGACAAAGGTAAAAGCGGTGGAAGTGATGATATTCAAGCGAAGTCGTCTTCGCATAGTCACCCAAAATGTTCATTCTTTGACTTGAATGAAGAAGCCGGTGATCAAGATGGGGCAGACAGAAGTGCTTCTTTTGTTCCAAATGGTGAAATCAGCAATGAGGGGTCATCTCCAGAAGGTAATCTGAGTGGCAATAGTTCAAGTGTTGATGGTAAACAAAGAACGATAGCAGTGAGACAATATGTTAGGTCCAAAATGCCAAGGCTCCGATGGACTCCCGATCTTCATTTAGCATTTGCGCATGCCGTTGAGAAACTCGGTGGACTAGAAAGAGCAACCCCTAAATTGGTTCTTCAGTTGATGAATGTGAGGGGCCTTAGCATTGCTCATGTCAAAAGTCATTTGCAGATGTACAGAAGCAAAAAATTAGATGAATCAGGCCAAGTCTTATATCAGACAAACCGGTCAGTGCAAGTAAGGAACCACGTCTGGGAACTGTACCAAAGATTCAGTGATCCGGGCCATCTTAGTATGGAGAATAGAACCCGTCATATACCAACTTCTTTTCAAATGGAACAGACACATGACTGCGGTTACCTCAACTCATCAAGATCAAGATTGGAGACATTTCATTTCAATGATTACTTCACAAGATCATCTAGTTCCCAATGGACCAAAGAACCTGAAAAGCTACACAGGGTGCCCCAGTTTGCAGGGTTCCACAAAGGAAACAAGCTGTTGACAAGCTCACATCTCTTGGATGTAAGGAACGCTGTAACAAGAAATGTACCACTTAGACCTTGCCAATTTCCTGAAGAGAAGAAGTGGCTACCCCATGACATGACGTGGAATAGAGGGACAGATGAACCTAGCCCTCTCAGTATTTCTTTGGACAGCAAGTATACCGTAGAACATACTTCTTGGACCAACAAGGGTAACCCTATGGCCAATCAAAGTTCTCCGAGTTTATACAGTGCTTCAATCTTCAATAATGCACCACATGGGTATAGAAACCCCTATGAATGTCAGCAGGTGCTGGATTGTGAACAAAAAGATGGAAGGGCTTTAATCACGAACGATCAAATATTGAAAGGGAGTGACCATAGACCTGAAATAGAATTGACGATGGGGAAGAAATGGCAACCGAACTTGCACCTAAGTTTGGGTACTGATAATGGAGAAAAAACGGAAGTTGTTGAAGGACGATGTGATAAAAAGGATATCAGTTCAACACTTTCTCTCTCTTTGTTTCCAACATCGTCGTCGTCGTCGTCGTCATCAAGGCAAGAAGTAATACAGCATGAAATGTTGAATTATAGTAGTAAGAAATTGTGTTTGCAATCAAATATGGCACTAAGGCTGGATTTGGGTTGA 1416 0.4223 MESVEENMSESIDISDKGKSGGSDDIQAKSSSHSHPKCSFFDLNEEAGDQDGADRSASFVPNGEISNEGSSPEGNLSGNSSSVDGKQRTIAVRQYVRSKMPRLRWTPDLHLAFAHAVEKLGGLERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLYQTNRSVQVRNHVWELYQRFSDPGHLSMENRTRHIPTSFQMEQTHDCGYLNSSRSRLETFHFNDYFTRSSSSQWTKEPEKLHRVPQFAGFHKGNKLLTSSHLLDVRNAVTRNVPLRPCQFPEEKKWLPHDMTWNRGTDEPSPLSISLDSKYTVEHTSWTNKGNPMANQSSPSLYSASIFNNAPHGYRNPYECQQVLDCEQKDGRALITNDQILKGSDHRPEIELTMGKKWQPNLHLSLGTDNGEKTEVVEGRCDKKDISSTLSLSLFPTSSSSSSSSRQEVIQHEMLNYSSKKLCLQSNMALRLDLG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01912 471 MobiDBLite consensus disorder prediction 1 85 - -
Pte15g01912 471 SUPERFAMILY Homeodomain-like 99 155 IPR009057 -
Pte15g01912 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 157 IPR017930 -
Pte15g01912 471 NCBIfam myb-like DNA-binding domain, SHAQKYF class 101 156 IPR006447 GO:0003677
Pte15g01912 471 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 80 206 IPR046955 GO:0003700
Pte15g01912 471 FunFam Two-component response regulator 96 158 - -
Pte15g01912 471 Gene3D - 100 157 - -
Pte15g01912 471 MobiDBLite consensus disorder prediction 24 38 - -
Pte15g01912 471 MobiDBLite consensus disorder prediction 60 85 - -
Pte15g01912 471 Pfam Myb-like DNA-binding domain 103 153 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01912 Pte-Chr15 25018192 25021392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01912 87 162 G2-like Transcription Factor Family AT2G42660 73.684 2.01e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g01912 Myb_DNA-binding 9.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01912 - - qsa:O6P43_028920 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01912 15 25018192 25021392 Pte15g01912 15 25018192 25021392 RCT