Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01909 ATGAGCAGATTAAACCAAGACAGATATCCAGGAGCCTGTGCTGCATGCAGACACCAAAGAAAGAGGTGTGGTGAAGATTGTATCTTGGCTCTTTATTTTCCCTCCAGCATGAAGCAACAATTCGATGCTGTACATACAGTTTTTGGAGTGAATCGTATAACGAAGTTGATCAAAAATGTTAGGGAGGAGGATCGAAAAAGAGTGGTGGATTCTTTAATATGGGAAGCAGGTTGCAGACTGAAGGATCCTGTGAACGGTCCTTATGGAGAGTATGAAAGACTTGTCAATGAGATTCAAGTTTACAAACGTCATCAAAATCAAACCCAAGCGGATGCGTCACTACCAGGACTATGTTTTGATGACATTTATAATGCTCTATTGGACAATTTTTGA 393 0.4046 MSRLNQDRYPGACAACRHQRKRCGEDCILALYFPSSMKQQFDAVHTVFGVNRITKLIKNVREEDRKRVVDSLIWEAGCRLKDPVNGPYGEYERLVNEIQVYKRHQNQTQADASLPGLCFDDIYNALLDNF* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01909 130 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Pte15g01909 130 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 111 - -
Pte15g01909 130 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01909 Pte-Chr15 24982020 24983548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01909 12 102 AS2 family AT1G06280 54.945 7.95e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g01909 LOB 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01909 - - fve:101295442 141.354