Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01893 ATGGCGGCTCCTCTGATTCGTTCTCTATGGTCTTCCACCAGAAGAACTCTTTCCATCCCATCAACACCTTCCTATCCTTACTCCTTATTCACACCCGCCACCGCCTTCTCGCGAGCATTCTCTGCTGCTCCGGCTACTGCTGCGGCCTCCTCCACTGCACCCAATACTTTCCTAGATCCGAGCCGCCTCCGGAACGTTGCAGTAATTGCTCATGTCGATCACGGAAAGACCACCCTCATGGACCGTCTGCTCCGTCAGTGTGGGGCCGATATACCACATGAACGGGCCATGGACTCTATCAGCCTGGAGCGTGAACGGGGTATCACAATTGCTTCGAAGGTAACTTCCATTTCTTGGAAGGAAAATGAACTGAACATGGTGGATACTCCCGGACATGCTGATTTTGGTGGTGAAGTTGAACGTGTTGTTGGCATGGTCGAAGGAGCTGTTTTAGTTGTAGATGCAGGTGAAGGTCCACTTGCACAGACAAAGTTTGTTCTTGCAAAGGCCTTGAGATATGGATTACGCCCTATTCTTCTTTTAAACAAAGTGGACAGACCCTCAGTTTCTGAGGAGCGTTGCGGTGAAGTTGAGAGCTTGGTGTTTGATCTTTTTGCGAATCTAGGAGCTACAGAGGAACAGCTAGACTTTCCTGTTCTGTATGCTTCTGCAAAAGAAGGATGGGCATCCACCTCTTTTACTAAGGATCCTCCAGAAGAGGCAAAAAATATGTCACAATTGCTTGATGCCATCATAAAACATGTTCCTCCACCCAAAGCGAGCATTGATTCCCCCTTTCAAATGCTGGTTTCAATGATGGAACGAGACTTCTATCTTGGGAGGATTTTGACAGGGCGCATATATTCTGGGATAATTCGTGTCGGTGATAAGGTCCATGGCTTGAGAAACAAAGAAACTGGAGCTGAGAAGATTGAAGATGGAAAGGTGACAAAACTGATGAAGAAGAAGGGCACATGTATGGTTCTAATTGACTCCGCCGGGGCAGGAGACATAATATCAATAGCTGGCTTGGCAAAACCATCAATAGGCCATACAGTGGCAAATGGAGAGGTGCTGTCTGCATTGCCCACTGTTGAGTTGGATCCACCAACAATTTCCATGACTTTTGGTGTGAATGACTCACCATTAGCTGGTCGTGATGGTACTCATTTGACAGGAGGGAGAATTGGTGATCGATTAATGGCAGAAGCAGAAACAAATCTTGCTATAAATGTAATCCCTGGATTATCTGAATCATTTGAAGTTCAGGGGAGGGGAGAGTTACAACTTGGTATCTTAATCGAGAATATGAGGCGTGAGGGATTTGAGTTGTCTGTCTCTCCACCAAAAGTAATGTATAAAACGGAAAATGGCCAGAAGCTTGAACCAATAGAAGAGGTGACAATTGAGGTAAATGAGGAGCATGTAGGGTTAGTGATGGAGGCGTTGTCTCACAGACGGGCTGAGGTCATGGACATGGGTCCTGTTGCTGGCAGTGTGGGTCGAACTAGATTGTCTTTGACTTGTCCATCAAGGGGTTTGGTTGGTTACCGAAGCGTGTTTAGCAGTGACACCCGGGGAACTGGTTTTATGCATCGAGCTTTCGTGAATTATGAGAGACATCGGGGTCCTCTTGGCAATGTCCGGAAAGGAGTATTGATTTCGATGGGGTATGGCTCAATCACTGCTCATTCTCTAATGAGCCTTGAGGCCCGTGGAACTCTGTTTGTGACTCCTGGCATGGAGACATATGATGGCATGATTATTGGTGAACATTCACGTGATACAGATCTAGATGTAAATCCAGCCAGGGCTAAAGAACTTACAAATGTGCGTGCTGCCTCCAAAGATGAGAATGTGAAGCTTTCTCCCCCTCGCCTTGTAAGTATCTCCAGTGTAATCCCGTATTCATTTGCAAATGAATGA 1926 0.4663 MAAPLIRSLWSSTRRTLSIPSTPSYPYSLFTPATAFSRAFSAAPATAAASSTAPNTFLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSISWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALRYGLRPILLLNKVDRPSVSEERCGEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTSFTKDPPEEAKNMSQLLDAIIKHVPPPKASIDSPFQMLVSMMERDFYLGRILTGRIYSGIIRVGDKVHGLRNKETGAEKIEDGKVTKLMKKKGTCMVLIDSAGAGDIISIAGLAKPSIGHTVANGEVLSALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVIPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGQKLEPIEEVTIEVNEEHVGLVMEALSHRRAEVMDMGPVAGSVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFVNYERHRGPLGNVRKGVLISMGYGSITAHSLMSLEARGTLFVTPGMETYDGMIIGEHSRDTDLDVNPARAKELTNVRAASKDENVKLSPPRLVSISSVIPYSFANE* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01893 641 FunFam GTP-binding protein TypA 453 547 - -
Pte15g01893 641 Gene3D Translation factors 261 364 - -
Pte15g01893 641 FunFam GTP-binding protein TypA 371 479 - -
Pte15g01893 641 CDD BipA_III 370 447 IPR047043 -
Pte15g01893 641 NCBIfam translational GTPase TypA/BipA 63 636 IPR006298 GO:0003924|GO:0005525
Pte15g01893 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 268 IPR027417 -
Pte15g01893 641 Gene3D - 61 259 IPR027417 -
Pte15g01893 641 NCBIfam small GTP-binding protein domain 64 203 IPR005225 GO:0005525
Pte15g01893 641 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 98 113 IPR031157 -
Pte15g01893 641 Gene3D - 453 547 - -
Pte15g01893 641 Pfam Elongation factor G C-terminus 460 542 IPR000640 -
Pte15g01893 641 SUPERFAMILY EF-G C-terminal domain-like 462 578 IPR035647 -
Pte15g01893 641 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 60 232 - -
Pte15g01893 641 CDD BipA_TypA_II 266 363 IPR047042 -
Pte15g01893 641 FunFam GTP-binding protein TypA 62 259 - -
Pte15g01893 641 Pfam Elongation factor Tu GTP binding domain 62 256 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 Gene3D Elongation Factor G (Translational Gtpase), domain 3 371 636 - -
Pte15g01893 641 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 61 259 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 Pfam Elongation factor Tu domain 2 280 353 IPR004161 GO:0005525
Pte15g01893 641 FunFam Elongation factor family protein 260 364 - -
Pte15g01893 641 CDD TypA_BipA 63 258 IPR047041 -
Pte15g01893 641 Gene3D bipa protein 548 628 IPR042116 -
Pte15g01893 641 SUPERFAMILY Translation proteins 208 363 IPR009000 -
Pte15g01893 641 PRINTS GTP-binding elongation factor signature 105 113 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 PRINTS GTP-binding elongation factor signature 125 135 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 PRINTS GTP-binding elongation factor signature 65 78 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 PRINTS GTP-binding elongation factor signature 177 186 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 PRINTS GTP-binding elongation factor signature 141 152 IPR000795 GO:0003924|GO:0005525
Pte15g01893 641 SUPERFAMILY EF-G C-terminal domain-like 368 451 IPR035647 -
Pte15g01893 641 FunFam GTP-binding protein TypA 548 633 - -
Pte15g01893 641 CDD BipA_TypA_C 462 542 IPR035651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01893 Pte-Chr15 24731286 24740948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01893 62 186 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 1.61e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01893 K06207 - gmx:100782425 1053.89