Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01881 ATGATTCTGCTTCTATTACTACTGATTCTTTCTTCTACGACGCCCACTCTCTCTCTCACTCAAGATGGCCTCCACCTACTTCAGATGAAACTCCAGCTCTCTGACCCTTCAGACTCCCTCTCTTCCTGGAACCCTCGCGATGACAACCCCTGCAACTGGTTTGGTATCACCTGTGATCCACAGACAGATAGAGTCAACTCAATAGTCCTCCCAAACTCTCAGCTCGCTGGACCTTTCCCCATTTTCCTTTGCCACTTACCTTATCTCTCCAACATTACTCTCGTCAACAACTCTATCAACTCCACACTCTTCACCATTGATTTCTCCAGCTGTAAAAATCTCCAATACCTTGACCTCTCCGAGAATCTCCTTGTCGGTCCCCTTCCTCCCTCCCTCGCCGATATCCCAAACCTCCGATTCCTCAACCTGTCTGGTAACAACTTCTCCGGCGAAATCCCAGCCAGCTTCGGTCACTTCCCGAAGGTTGAATATCTGATTCTTTTTGAGAATCTCTTGAATGGGACTATACCCAGTTTTCTGGGTAACATTTCAACTCTCAAGGAACTTCGACTTGCATATAACCCGTTTGCTCCGAATGTGATTCCGAGTGAACTCGGTTACTTGACGAACCTTGAATATCTATGGTTAGCCGGTTGTAACCTTGTCGGTACAATTCCGGCGAGTTTGACTAAGCTTCCTCGGCTAACGAACCTTGACTTGTCATCGAATGGGCTCACGGGGTCTATTTCGCCCTCCATTGTTGAGCTCAAAAGCATAATTCAAATTGAGCTCTATAACAACTCTCTCTCGGGGGTGTTGCCTAAGGGTCTATCGAATTTAACTAATTTAAGAAGATTTGACCTTTCCATGAACCAGTTGACGGGGACGATTCCCGAAGAGCTGTGCAGGTTGCCACTTGAGTCTCTGAATTTGTTTGATAACCGATTTGAAGGGTTTTTACCTGAGAGTATAGCTCTGTCACCGAATTTGTACGAGCTCAAGCTGTTCAACAATAAACTCAGTGGGCAACTCCCGAGTGAACTCGGCAAGAACTCGGGGTTACAGAGTCTGGACATGTCATATAATGAATTTTCTGGTGAAATTCCGGAGACATTGTGTGAACAAGGAGCGCTGGTAGATCTCATATTGATATACAATTCATTTTCCGGGAAAATACCTGATAGTCTGGGAAAATGTCAGAGTTTGAACAGGGCACGTCTTAGGAACAACAAACTTTCAGGGAATGTTCCCGAGGCATTCTGGGGCCTACCTCACCTGTATTTACTTGAACTTGCTGAGAATTCCTTATCTGGGGAGATTTCCAATTCCATATCCGGTGCAAACAATCTTTCAGTTTTGTTAATTTCTAGAAATCAATTTTCAGGGTCCATACCAGAGGAAATTGGGTTTTTGGGTAACCTACTTGAATTTTCTGGTAGCAATAATAAGCTAACTGGTACAATTCCTAGAACTATAGTAAAGTTGACTCAGCTTGGTAAGCTTGATTTAAGCAATAATGGACTTTCGGGCGGGATCCCACCTGGAATCCATGGTTGGAAGAAGCTTAATGAGCTAAATTTGGCAAACAACAAGCTTCATGGTGAAATTCCTTATGAGATTGGAAGCTTGCCGGGTCTTAATTTTCTTGATCTTTCTGGGAATTACTTCTCTGGTGTTATCCCATCAGCACTGCAAAATTTGAAACTGAATTTGCTCAACTTGTCCAACAATGAGCTTTCAGGTGGCATCCCTCCGCTTTACTCTGATGAAAATTATAGAACTAGCTTTCTCGGGAATCCAGGTCTGTGCGGTGACCTCCCTGGACTTTGTACAGGTTTAAGTGAGAGCAAGAGAAATCAGTGGGTTTTCAGATCAATCATTTTGATTGCTTTCATTGTTTTCGTCACCGGGTTAGGTTGCTTTTACATGAAATACCGAAAATTCAAGAAGATGAAAGAGGGGCATGCCATGGCAAAGTGGAAGTCTTTCCATAAACTCGGATTCAGTGAGTTTGAGGTTATTAAATGCCTTGACGAAGACAATGTCATCGGTACCGGAGCCTCTGGGAAAGTCTACAAGGTTACACTCGGTAACGGTGAGGTAGTAGCAGTGAAGAAACTGTGGAGATCAAATAAGGATAACCATAGTGAAGGATCAGAGAAGGATGAATTCGAAGTCGAGGTGGAAACACTGGGAAAGATTAGGCATAAAAATATTGTAAGGTTATGGTGTTGCTGCAACAGTGGAGAGAGCAAACTCCTAGTATATGAATATATGCCAAATGGAAGCCTGGGTGATTTGTTGCATGGAAATAAGAAGAGGGGTCTGTTAGACTGGCCAACCAGATATAGAATTGCCCTAGATGCAGCTGAAGGACTCTCTTATCTCCATCATGATTCTGTTCCTCCCATTGTTCACAGAGATGTCAAATCTAACAATATTTTGATAGATGCAGAGTTTGGTGCTAAAGTTGCCGACTTTGGAGTTGCTAAAATTTTTAGAGGAACCACCCTTGGGGCTGAATCCATGTCTGTGATAGCAGGTTCTTGGGGCTACATTGCGCCAGAATATGCTTACACTCTGCGAGTAAACGAGAAGAGCGACATATATAGTTTTGGAGTAGTCATTTTGGAGTTAATAACAGGGAAGCCTCCTGTTGGTCCAGAGTATGGAGAAAAGGACTTGGTAAAATGGGTATGTAAAATATTGGAACAGAAAGATGTTGACCATGTGATTGATTCTAATCTGGAGTCCATGTACAAGGAAGAAATTGGCAAGGTACTCAACATAGGGCTTCTTTGCACAAGCTCACTGCCAATAAACCGTCCTTCCATGCGCAAAGTGGTGAAGATGTTGCAAGAAGCAGTCGTCTCCGATGGGAAGACAAAAATTAACAAGGATGGGAGGCTCTCCCCTTACTACTAG 2925 0.4352 MILLLLLLILSSTTPTLSLTQDGLHLLQMKLQLSDPSDSLSSWNPRDDNPCNWFGITCDPQTDRVNSIVLPNSQLAGPFPIFLCHLPYLSNITLVNNSINSTLFTIDFSSCKNLQYLDLSENLLVGPLPPSLADIPNLRFLNLSGNNFSGEIPASFGHFPKVEYLILFENLLNGTIPSFLGNISTLKELRLAYNPFAPNVIPSELGYLTNLEYLWLAGCNLVGTIPASLTKLPRLTNLDLSSNGLTGSISPSIVELKSIIQIELYNNSLSGVLPKGLSNLTNLRRFDLSMNQLTGTIPEELCRLPLESLNLFDNRFEGFLPESIALSPNLYELKLFNNKLSGQLPSELGKNSGLQSLDMSYNEFSGEIPETLCEQGALVDLILIYNSFSGKIPDSLGKCQSLNRARLRNNKLSGNVPEAFWGLPHLYLLELAENSLSGEISNSISGANNLSVLLISRNQFSGSIPEEIGFLGNLLEFSGSNNKLTGTIPRTIVKLTQLGKLDLSNNGLSGGIPPGIHGWKKLNELNLANNKLHGEIPYEIGSLPGLNFLDLSGNYFSGVIPSALQNLKLNLLNLSNNELSGGIPPLYSDENYRTSFLGNPGLCGDLPGLCTGLSESKRNQWVFRSIILIAFIVFVTGLGCFYMKYRKFKKMKEGHAMAKWKSFHKLGFSEFEVIKCLDEDNVIGTGASGKVYKVTLGNGEVVAVKKLWRSNKDNHSEGSEKDEFEVEVETLGKIRHKNIVRLWCCCNSGESKLLVYEYMPNGSLGDLLHGNKKRGLLDWPTRYRIALDAAEGLSYLHHDSVPPIVHRDVKSNNILIDAEFGAKVADFGVAKIFRGTTLGAESMSVIAGSWGYIAPEYAYTLRVNEKSDIYSFGVVILELITGKPPVGPEYGEKDLVKWVCKILEQKDVDHVIDSNLESMYKEEIGKVLNIGLLCTSSLPINRPSMRKVVKMLQEAVVSDGKTKINKDGRLSPYY* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01881 974 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 19 183 - -
Pte15g01881 974 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 759 969 - -
Pte15g01881 974 FunFam Leucine-rich receptor-like protein kinase family protein 201 299 - -
Pte15g01881 974 Gene3D Phosphorylase Kinase; domain 1 659 758 - -
Pte15g01881 974 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Pte15g01881 974 FunFam Receptor-like protein kinase HSL1 305 612 - -
Pte15g01881 974 SMART LRR_typ_2 232 256 IPR003591 -
Pte15g01881 974 SMART LRR_typ_2 543 566 IPR003591 -
Pte15g01881 974 SMART LRR_typ_2 280 304 IPR003591 -
Pte15g01881 974 SMART LRR_typ_2 495 518 IPR003591 -
Pte15g01881 974 SMART LRR_typ_2 135 158 IPR003591 -
Pte15g01881 974 Gene3D Ribonuclease Inhibitor 306 619 IPR032675 -
Pte15g01881 974 SUPERFAMILY Protein kinase-like (PK-like) 672 952 IPR011009 -
Pte15g01881 974 Pfam Protein kinase domain 679 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01881 974 Gene3D Ribonuclease Inhibitor 18 199 IPR032675 -
Pte15g01881 974 Gene3D Ribonuclease Inhibitor 200 305 IPR032675 -
Pte15g01881 974 Pfam Leucine rich repeat N-terminal domain 21 59 IPR013210 -
Pte15g01881 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Pte15g01881 974 SUPERFAMILY RNI-like 308 581 - -
Pte15g01881 974 ProSiteProfiles Protein kinase domain profile. 677 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01881 974 FunFam Receptor-like protein kinase HSL1 660 758 - -
Pte15g01881 974 Gene3D Transferase(Phosphotransferase) domain 1 759 969 - -
Pte15g01881 974 SUPERFAMILY L domain-like 37 369 - -
Pte15g01881 974 Pfam Leucine rich repeat 87 148 IPR001611 GO:0005515
Pte15g01881 974 Pfam Leucine rich repeat 233 293 IPR001611 GO:0005515
Pte15g01881 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 185 954 - -
Pte15g01881 974 SMART serkin_6 677 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01881 Pte-Chr15 24355163 24359266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01881 15 974 Receptor kinase-like Gene Family AT1G28440 60.941 0.0 1162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte15g01881 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01881 - - mnt:21393816 1340.87