Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01871 ATGGCTGCTCATGACCCTCTCCTTCCATGGCTTTGGTCCATCAAGGAAGCCATTGAAGACTCGAGCTCAGAAAATGGTCCACGGGTCCGTGTGCTCAATCTTCTTTCGGACTGCGTTAGCAATTTCAAGGGCAATCAGCAATACCGAAACGACATCCGATTCCTCAAGATCTGGATTCTCTATATGGGTGTCAGCGAGAATTTTGAAAATGTATTCAAAGAAATGATGGATAGTAAAGTATGTGTCAGAAATTCTTCACTGTATGTATGGTCTGCTTGTTTTCTCGAATCAAAAGGGAAATTGCAAGATGCCCATAATCTCTATCAGCTCGGAATCTCCAGGAACGCAGAGCCGATTGGTTGGTTGAAGAAAGCACACACCTTGTTTCTTAGTAGGGTATCTGAACTCGTAAATGTTGCTTCAGTTGAGGCTGATGATAAAACATGCTCGGGGGATGTTGAAATCAATCCATGGTCAGCCTCCATTCTGAAAGACTTGTTGAAAAAGATAAACCCCTTAATCATAAAATATGATGGATATCATTCTTATCCTAAAGCGTACTCAGGAAAAGTGGCTTTGTCTTCTTTACGAAATGGATCAAGGAATAAAATGCTAGAACTAGGTGGAAAAAAGTATCAGATCAAAGGTTGTGCTGGGAAGGGAGGTTTTGCTCAAGTATATAAGGCATTTGTGAATAGTAGTCCTGATGATGTCGTTGCTCTGAAGATACAAAAGCCTGCTTTCCCCTGGGAATTCTACATGTATCGACAAATTGACTTGCGCATCTCAGAGAAAGAAAGGTCAAGCTTTGGATTTGCTCATCGACTCCATCTCTATTCTGACTGCAGCATTCTTGTCTGTGACTACCTAGCTCATGGGACTCTTCATGATGTCATAAACTCCTACGCAGTTCAATCGAAGACAATGGAAGAAATATTGTGTATTTATTATACCATAGAAATGCTCCACATGCTTGAAAATTTGCATGATGTTGGCATCATTCATGGTGATTTCAAGCCTGACAATCTACTTATTCGATATTCTAGAGATGAGCTCACAGAAGAAGGGTTTATTGAGCGAACTGGTCCCTGGCGTAATCAGGGTCTTTGCCTTGTTGATTGGGGAAGAGGAATAGATTTACTTCTCTTTCCTGAATATACGAAGTTCAGAGCAGACTGCCGAACTTCGGGGTTTCGTTGTATCGAAATGCAGGAGAATAAGCCCTGGAGATTTCAGGTAGACATATATGCCCTTTGTGTTGTTGTGCACACGATGTTGCATGGCTCTTACATGGAGATTGAGAAGAAAGCATCGTCCAATGGGGATTTTATTTATTATCCTAAATTACCTTTTAAACGCTACTGGAACATCGAACTCTGGAAAAATTTCTTCACCATGCTGCTAAATCAGTGCCCTGGTGATGATAACAAGAGTTTGTTAAGGAACGCAAGGGAGTCCTTCCAGACTTATTTGTATTCGGACAAACAGCTCATGAGAAAGTTGAAGGAGTTACTGGTGAAGCAAAAGACTTCTTTGTGCACCTCATAG 1548 0.4134 MAAHDPLLPWLWSIKEAIEDSSSENGPRVRVLNLLSDCVSNFKGNQQYRNDIRFLKIWILYMGVSENFENVFKEMMDSKVCVRNSSLYVWSACFLESKGKLQDAHNLYQLGISRNAEPIGWLKKAHTLFLSRVSELVNVASVEADDKTCSGDVEINPWSASILKDLLKKINPLIIKYDGYHSYPKAYSGKVALSSLRNGSRNKMLELGGKKYQIKGCAGKGGFAQVYKAFVNSSPDDVVALKIQKPAFPWEFYMYRQIDLRISEKERSSFGFAHRLHLYSDCSILVCDYLAHGTLHDVINSYAVQSKTMEEILCIYYTIEMLHMLENLHDVGIIHGDFKPDNLLIRYSRDELTEEGFIERTGPWRNQGLCLVDWGRGIDLLLFPEYTKFRADCRTSGFRCIEMQENKPWRFQVDIYALCVVVHTMLHGSYMEIEKKASSNGDFIYYPKLPFKRYWNIELWKNFFTMLLNQCPGDDNKSLLRNARESFQTYLYSDKQLMRKLKELLVKQKTSLCTS* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01871 515 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 151 509 IPR015661 GO:0007094
Pte15g01871 515 ProSiteProfiles Protein kinase domain profile. 212 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01871 515 Pfam Mad3/BUB1 homology region 1 3 112 IPR013212 -
Pte15g01871 515 Gene3D Transferase(Phosphotransferase) domain 1 209 513 - -
Pte15g01871 515 Gene3D - 1 148 - -
Pte15g01871 515 SUPERFAMILY Protein kinase-like (PK-like) 209 467 IPR011009 -
Pte15g01871 515 ProSiteProfiles BUB1 N-terminal domain profile. 1 150 IPR013212 -
Pte15g01871 515 SMART serkin_6 212 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01871 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Pte15g01871 515 SMART mad3_bub1_i 1 112 IPR013212 -
Pte15g01871 515 Pfam Protein kinase domain 214 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01871 Pte-Chr15 24178060 24181885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01871 101 345 Receptor kinase-like Gene Family AT2G19210 27.863 2.41e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Pte15g01871 Pkinase 6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01871 K02178 - qsa:O6P43_000750 764.222