Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01867 ATGGATACTGGAAATTTTGAAGGCTTGTTTTATAATAAGCAAAAGATGGGAAAAGAGAAGACTTTGAAAAGGGAGACCATGCTCGAGTATGATGATGATGGCAACGATGACAGTGGTAACTCAGAAGAAGAGAAGATGAAAGTTTCGACATTTAGTAGTGTGGCTGGGAGAAAAGGGTCAAGTGGAGGTGGTGGCCGTGGGATAAGGTGCTGTCAAGCTGAGAAATGCGCAGCTGACCTGACTGATGCAAAGCCGTACTATAGGAGGCACAAAGTATGCCAGCTTCATGCTAAATCTCAGGTTGTGCTCGTGGCTGGGATATGCAAGCGGTTTTGTCAGCAATGCAGCAGATTTCATGAGCTAGCAGAATTTGACGACACCAAGAGGAGTTGCAGGAGGCGTTTGGCTGGACACAATGAAAGGCGAAGAAAGGCGCCTGGTGAGCCTAATGCAGCAGACGGATCAAACCGCAAAGCAAGTACGCAGCTGAAGGGAACCTCCTTTCGGAAAATTGATGATGGAGCAAGAATTCAGATACGCGAAGAAGAAAATGCCTCTCAACCATTTTCAGATCAGATGAGATAG 585 0.4632 MDTGNFEGLFYNKQKMGKEKTLKRETMLEYDDDGNDDSGNSEEEKMKVSTFSSVAGRKGSSGGGGRGIRCCQAEKCAADLTDAKPYYRRHKVCQLHAKSQVVLVAGICKRFCQQCSRFHELAEFDDTKRSCRRRLAGHNERRRKAPGEPNAADGSNRKASTQLKGTSFRKIDDGARIQIREEENASQPFSDQMR* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01867 194 MobiDBLite consensus disorder prediction 135 194 - -
Pte15g01867 194 Gene3D - 62 132 IPR036893 GO:0003677|GO:0005634
Pte15g01867 194 MobiDBLite consensus disorder prediction 22 65 - -
Pte15g01867 194 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 154 IPR044817 GO:0003677
Pte15g01867 194 SUPERFAMILY SBT domain 69 147 IPR036893 GO:0003677|GO:0005634
Pte15g01867 194 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Pte15g01867 194 Pfam SBP domain 71 144 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01867 Pte-Chr15 24155756 24157842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01867 54 180 SBP-box Gene Family AT1G53160 51.969 1.60e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pte15g01867 SBP 7.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01867 - - qsa:O6P43_028828 185.267