Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte15g01836 | ATGAATACAGTTCTGAATTTGCGTATTGATCAGAAAATGGCCTTGGATGAGTACCTTGAGGAGGCAGTAGACCAGATTAACACTCTTGCAGAAGATAAATCTACTTTGAGAAGATGGAATGCAATCTCTGATACTGATGCAAATGAATCTGGAGGTTTTGATTGCAATATCTGCCTGGGTTCTGTGGAAGACCCTGTAGTCACACTCTGTGGTCATCTTTACTGCTGGCCTTGCATCTACAAGTGGCTTGATCACTTCCATGGTAGCTCCAGTGAACACCAAGAACATCAACCACCAAAATGCCCTGTCTGTAAAGCAGAGGTTTCTAAGGCTTCATTAGTGCCCCTCTATGGTCGCGGTCAAACTATCAATTCTTCCAAAGACAAGGGTCATCTGATTCCAAGAAGACCTCAAGGTCCAGCATGTAGATTAAACACACAGAGATCAACTCATCCTAGCACAAGTCGTCAACCAGTTCCACAAGTTCATGATCATTATTATCCTTATGCATCCGTCCCGTTTAACTCATTACAAAGCCCTTATACTTCCCATTTTCTAAGGCCTGGGGTCTCCATAACCAATGTATTTGATCCAATATTTGGAGTCTTTGGGGAGATGTTACACACAAGGGTATTTGGGAATTCGGTAACAGGTTTATATACTTATCCAAATAGCTATAATCTTACAGGAAGCGGCAATCCTAGAGTTAGAAGACAAGTGATGCAAGCTGATAAATCACTCAGCAGAATATGTTTTTTTCTATTTTGTTGCGTAGTTCTCTGTCTTCTTCTGTTCTAA | 798 | 0.4123 | MNTVLNLRIDQKMALDEYLEEAVDQINTLAEDKSTLRRWNAISDTDANESGGFDCNICLGSVEDPVVTLCGHLYCWPCIYKWLDHFHGSSSEHQEHQPPKCPVCKAEVSKASLVPLYGRGQTINSSKDKGHLIPRRPQGPACRLNTQRSTHPSTSRQPVPQVHDHYYPYASVPFNSLQSPYTSHFLRPGVSITNVFDPIFGVFGEMLHTRVFGNSVTGLYTYPNSYNLTGSGNPRVRRQVMQADKSLSRICFFLFCCVVLCLLLF* | 266 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte15g01836 | 265 | ProSiteProfiles | Zinc finger RING-type profile. | 55 | 105 | IPR001841 | - | |
Pte15g01836 | 265 | SMART | ring_2 | 55 | 104 | IPR001841 | - | |
Pte15g01836 | 265 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 5 | 124 | IPR013083 | - | |
Pte15g01836 | 265 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 20 | 262 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Pte15g01836 | 265 | Pfam | Zinc finger, C3HC4 type (RING finger) | 55 | 85 | - | - | |
Pte15g01836 | 265 | MobiDBLite | consensus disorder prediction | 142 | 158 | - | - | |
Pte15g01836 | 265 | SUPERFAMILY | RING/U-box | 36 | 110 | - | - | |
Pte15g01836 | 265 | MobiDBLite | consensus disorder prediction | 120 | 158 | - | - | |
Pte15g01836 | 265 | ProSitePatterns | Zinc finger RING-type signature. | 70 | 79 | IPR017907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte15g01836 | Pte-Chr15 | 23604299 | 23607193 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte15g01836 | 44 | 266 | C3H Transcription Factor Family | AT4G28270 | 40.435 | 1.54e-45 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte15g01836 | K10666 | - | cave:132182471 | 273.478 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte15g01836 | 15 | 23604299 | 23607193 | Pte15g01836 | 15 | 23604299 | 23607193 | RCT |