Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01832 ATGGCTGAAGCTAGTAATAAGGGTGAATCCATGAAGGGTTTTGATGAAACCGACATGAAGACTCAAATGGAAGCGAGTCAAGACTGGGAAGTCGACAAGGGGAAAGACCTTGATTTGAGAATTCAGAGCCAGCGTCAGTGGAAGACAATCTTTGATGAAGCTTGCTTCCCTCACAGACCCCTTAAGAAGATACGTAGCCCTGAACGTCAAGACCCATCTGTGTTCTCTCCTTCCTCGTCGTCTGTTGCTCTTCCATCTACTTCTTCTTCTCGAGCACTCTCTCCTCTTTCATATCCGTCATCTGCTTCCTCAAAAATTATGTTTCCTTTTGCATTTGATGGATTTCAAAGGCCTGTGCAGTTTTCACAACAATTTTCAAACACTAATTTCCCTCTGTTTCGTCCTCCGCCTCAGCGCCCTTCACAGAATCAACAGCAAATGATCTCTTCTATCCCTTATCAAAACAACATCCCCTGCCAACCATTCTTAGCTGGAGACTTTCAATGTTCACAGCAGCAGCAGCAGCAGCAGCTTCTTCAATATTGGAGTGATGCATTAAATCTCAGCCCAAGACGAAGAATGATGACGGTGAACAGGTTAGGACCTGAATGTAGGCCGTTGTATGGGCCTCCTGTACAGCCTATAAATACTACAAAACTTTACAGAGGAGTGCGGCAACGCCATTGGGGCAAATGGGTTGCTGAAATTCGTCTTCCTCGCAACAGGACTCGTCTCTGGTTAGGTACATTTGACACTGCTGAAGATGCTGCCTTGGCATATGACAGAGAGGCCTTCAAATTGAGAGGAGAGAACGCTAAGCTCAATTTTCCAGAGTTTTTTCTCAACAAGGATAACGCACCGACCGCAGCTCCAACTTCAAGCCAGTATACAAATGATATTCAACAAGTTTCACAAGGCCCTTACATGCTGCCGCCGCCGCAAGCAGCTGATGAAACTCTCGACAATGATTCAGGAGTTGAGTCTAGCGACATGACTGTAAGCGACGAAGTCCAGGCATCTGGAGTTCTAAGTGAGACTGCAGAAGGTACAACAGAGTCACAAGAATCAGTTTGGGGTGAAACGGCAGAAGCTTGGTTCCATACTATACCAGCTGGTTGGGGTCCTGGTAGTCCTGTATGGGATGATTTTGACAGCACCACCCATCATCTCCTACTTCCATCACAGTTTTCTTTTATGAATCCAACTCAACAGCAAGAATTCAATGAGACATGCAAAGAAGATGATAACACAGACCTTCAGGCTCTTCCTCCTCCTCTCTTTTCCAAGGATGAAGATTGA 1299 0.4573 MAEASNKGESMKGFDETDMKTQMEASQDWEVDKGKDLDLRIQSQRQWKTIFDEACFPHRPLKKIRSPERQDPSVFSPSSSSVALPSTSSSRALSPLSYPSSASSKIMFPFAFDGFQRPVQFSQQFSNTNFPLFRPPPQRPSQNQQQMISSIPYQNNIPCQPFLAGDFQCSQQQQQQQLLQYWSDALNLSPRRRMMTVNRLGPECRPLYGPPVQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENAKLNFPEFFLNKDNAPTAAPTSSQYTNDIQQVSQGPYMLPPPQAADETLDNDSGVESSDMTVSDEVQASGVLSETAEGTTESQESVWGETAEAWFHTIPAGWGPGSPVWDDFDSTTHHLLLPSQFSFMNPTQQQEFNETCKEDDNTDLQALPPPLFSKDED* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01832 432 SMART rav1_2 220 283 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 SUPERFAMILY DNA-binding domain 220 277 IPR016177 GO:0003677
Pte15g01832 432 FunFam Ethylene-responsive transcription factor 2 219 278 - -
Pte15g01832 432 Pfam AP2 domain 221 269 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 MobiDBLite consensus disorder prediction 9 35 - -
Pte15g01832 432 MobiDBLite consensus disorder prediction 71 95 - -
Pte15g01832 432 PRINTS Ethylene responsive element binding protein signature 243 259 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 PRINTS Ethylene responsive element binding protein signature 221 232 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 MobiDBLite consensus disorder prediction 307 335 - -
Pte15g01832 432 MobiDBLite consensus disorder prediction 321 335 - -
Pte15g01832 432 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 28 383 - -
Pte15g01832 432 CDD AP2 219 278 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 Gene3D AP2/ERF domain 220 278 IPR036955 GO:0003700|GO:0006355
Pte15g01832 432 MobiDBLite consensus disorder prediction 404 432 - -
Pte15g01832 432 ProSiteProfiles AP2/ERF domain profile. 220 277 IPR001471 GO:0003700|GO:0006355
Pte15g01832 432 MobiDBLite consensus disorder prediction 61 95 - -
Pte15g01832 432 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01832 Pte-Chr15 23465437 23466735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01832 1 383 AP2-EREBP Transcription Factor Family AT2G20880 42.228 1.04e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte15g01832 AP2 3.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01832 - - qsa:O6P43_028790 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01832 15 23465437 23466735 Pte15g01832 15 23465437 23466735 RCT