Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01817 ATGAAAGTACCATGTTGTTCTGTGTGCCAGACTAGATACAACGAAGATGAAAGGGTCCCGCTTTTACTTCAATGTGGACATGGGTTTTGTAAAGAGTGTCTTTCTAGGATGTTCTCTGCTTCCCCAGACACAACGTTGCCATGTCCGAGGTGTCGTCATGTGTCGGTTGTTGGGAACTCAGTTCAAGCTTTGAGGAAAAACTATGCCGTTCTTGCTCTTATTCACTCGGCTTTGAATACTTCCGGTGGCAACTTTGACTGTGATTACACTGACGATGAGGAAAATGGCGATGAAGATGAGGATAATGGTGATAATGAAGAGCACTTGGTTTTGCGACGGCGCTGGTGTAGCCGTGGATCACAGGCATCGAGTTCAGGTGGGTGTGGGCCGGTGATCGAGGTTGGAGGGCTTCACGAGTTGAAATTGGTGAGCAAGATAGGAGAAGGAAGGAGGGCTGGTATTGAAATGTGGACGGCAGTGGTTGGTGGTGGTGATGGTGGGCGGTGCAGGCATCATGTGGCTGTGAAGAAGGTGTCAGTAGTGGATGATATGAATTTAGATTGGGTACAGGGAAAGCTTGAGAACTTGCGGCGAGCATCAATGTGGTGCAGAAATGTGTGTACTTTTCATGGGGCTTTAAGGATGGAGGGAAGTTTTTGTCTTGTGATCGACAGGTGTTATGGGTCTATTCAATCTGAGATGCAGAAAAATAAGGGAAGGCTTACTTTGGAGCAAATCCTAAGATATGGGGCTGATATAGCTCGAGGAGTGGCTGAACTTCATGCAGCAGGTGTCATATGTATGAATTTAAAACCATCCAATCTTCTTCTGGATGCTAGTGGTCATGCTGTGGTTTCTGATTATGGACTTTCCTCCATTCTGAAGAAGCCTTCTTGTCGAAAAGCTCGACCAGAGTGTGATTCTTCAAAAGTCCATTCATGTATGGAGTGTACAATGCTCAACCCGCACTATGCAGCACCTGAGGCATGGGAACCAGTAAAGAAGTCATTAAACTTATTCTGGGATGATGCAATGGGCATATCTGCAGAGTCAGATGCATGGAGTTTTGGTTGTACATTGGTAGAGATGTGCACCGGTTCCATTCCTTGGTCTGGTTTAAGTGCAGAGGAGATTTACAGAGCTGTTGTTAAGGCACGGAAACTACCTCCACAATATGCAAGCGTTGTTGGTGTTGGCATGCCTAGGGAACTGTGGAAAATGATAGGTGACTGTTTTCAGTTCAAAGCAGCCAAAAGACCAACTTTTAATGCGATGTTAGCAACATTTCTCCGCCATTTGCAGGAGATACCTCGCAGTCCCCCTGCAAGCCCAGACAATGACCTTGCTAAATCTTCTGTTGCAAATGTGTTGGTACCATCTCCTTCATCTGATTCTGAGATTTCTCAAGGAAATCCAAACCATCTTCATCAACTTGTGTCTGAAGGCAACTTGATAGGTGTTAGGGAACTTCTTGCAAAGGCTGCATCAGGAAATGGTAACAACTCGGTAAATTACCTCCTGGAAGCTCAAAATGCTGATGGTCAAACAGCCCTCCACTTAGCTTGCAGACGCGGCAGTGCAGAAATTGTAGAGGCTATTTTGGAGTATAGAGAGGCAAATGTTGACGTCCTTGATAAAGATGGAGATCCTCCACTTGTGTTTGCTTTGGCAGCAGGATCCCCTGAATGTGTTCGCAGTCTCATCAATAGAGGTGCCAATGTCAGCTCTGGTCTTAGAGATGGCCTTGGTCCTTCTGTGGCTCACGTTTGTGCCTACCATGGCCAACCTGATTGCATGCGTGAATTATTACTGGCTGGAGCAGATGTTCATGCTGTTGATGATGAAGGTGAGACTGTACTGCACAGAGCTGTTGCCAAGAAGTATACTGACTGTGCCCTTGTAATATTGGAAAGTGGGGGTTGCAGTTCAATGGGCATTTTAAATTCAAAAAAAATGACTCCATTGCATTTGTGTGTGGCTACATGGAACGTTGCTGTGGTTAAAAGGTGGGTGGAAGTTGCAACTCCAAAAGAAGTGGCTGATGCTATTGATGTAAAAAGCCCTGTTGGCACTGCATTATGTATGGCTGCTGCTGTGAAGAAAGATCATGAAATTGAAGCCAGGCAACTGGTCAGGGTACTGCTTGCAGCAGGTGCAAATCCGTTTGCTCTAGATACTCAGCATGGTCGGACAGCTTTGCATGCAGCTGCCATGGCTAATGATGTTGAGTTGGTAAAGGTTATTCTTGATGCTGGCGTTGATGTAAACATCCGGAATGGGCATGGTACCACACCTTTGCATGTAGCATTGGCCAGAGGGGCCAATTCATGTGTTGAATTGCTTCTATCTGCTGGGGCTGATTACAATTGGCAGGATGATGAAGGCGACAATGCTTTTCATATAGCCGCAGATGCTGCAAAAATGATACGGGAAAACCTGGACTGGCTTATTGTGATGCTAAGGAATTCTGATGCTGCTGTGAATGTCAAAAACCACAGGCAAGTAACATTACGGGACTTCCTGGAAATGCTTCCTAAAGAGTGGATTTCTGAAGATCTAATGGAAGGACTCATACAAAGAGACGTTTATCTGTCTCCTACAATATTTGAAGTGGGAGACTGGATAAAATTCAAGAGGACTGTGACTACTCCAAAGTATGGGTGGCAAGGATCTGGGCACAAGAGTGTCGGATTTGTACAAAGTGTTCCAGACAAGGACCACTTAATTGTCTCATTCTGCTCTGGAGATGCTCGTGTTTTGGCAAATGAAGTTATAAAAGTGATTCCATTAGACAGGGGACAGCATGTACAGCTGAAAGCAGATGTAGCTGAACCCAAGTTTGGTTGGCGTGGGCAATCACGGGACAGCATTGGAACAGTTTTATGTGTAGATGATGATGGTATTCTTAGAGTTGGGTTTCCTGGAGCTTCCAGAGGATGGAAAGCTGATCCTGCTGAGATGGAGAGAGTCAAGGAATTCAAGGTTGGTGATTGGGTTCGTATACGTCCCACTCTTACAAGTGCAAAGCATGGACTAGGGTCTGTCACTCCAGGAAGCATTGGGATTGTGTATTGTATCAGACCAGATAGTAGTCTATTGCTAGAGCTTAGTTATCTTCCTAACCCATGGCACTGTGAGCCAGAGGAGGTTGAACCAGTCTCTCCTTTTAGGATTGGTGATCGGGTATGTGTTAAGAGATCTGTTGCCGAACCTAGATATTTATGGGGTGGTGAAACACATCATAGCGTTGGAAGGATTAGTGAGATAGAAAGTGATGGCCTCCTCATCATTGAAATACCAAATCGCCCTATTCCATGGCAGGCCGATCCCTCTGATATGGAGAAGGTTGAAGATTTCAAGGTTGGAGATTGGGTTAGAGTAAAGGCTTCAGTACCTTCGCCAAAATATGGATGGGAAGACATCACAAGAAACAGCATTGGCATCATTCATAGCTTAGAGGAAGATGGTGATATGGGCATTGCCTTTTGCTTCAGAAGCAAGCCTTTTGTTTGTTCTATGACAGATGTTGAGAAAGTTTCCCCTTTTGAGGTGGAGCAAGTGATTCATGTGATGCCATCTGTTTCTCAACCTCGTCTTGGATGGTCAAATGAAACTCCTGCAACTGTTGGTAAAATTGTGACAATTGACATGGATGGAGCACTAAATGTAAAGGTTGCTGGCAGGAAAAGCTTGTGGAAAGTTTCTCCTGGGGATGCAGAAAGACTTTCAGGATTTGTGGTTGGTGACTGGGTACGATCAAAACCAAGCCTTGGAAATAGGCCTAGCTATGACTGGAACAGTATTGGAAAAGAAAGTCTAGCTGTTGTGCACAGTGTCCAGGATTCTGGCTACTTAGAATTGTCTTGCTGTTTCCGTAAAGGGAAATGGATTACTCACTATACAGACGTTGAAAAGGTCCCAAGCTATAAAGTAGGGCAGTATGTCCAATTCAGGAAAGGAGTAGTTGAGCCTAGGTGGGGTTGGAGAGGAGCTTGCCCTGAATCGAAGGGCGTTATAACCAGTGTTCATGCTGATGGAGAAGTGAGAGTTGCATTCTATGGTGTGCCAGGTTTGTGGAGAGGTGATCCTGCTGACCTTGAGATAGAACATATGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAACATGATGGCAGCCAATGGAAATCAGTAATGGCAGGTAGCATTGGTGTGGTACAAGGTATTGGGTATGAAAATGAATGGGATGGAAACATTTCAGTTGCCTTTTGCGGGGAGCAAGAAAAATGGGTAGGCCCAACTTCTAGTCTCGAAAGAGTTGACATGCTCATGATTGGGCAGAGGGTTAGAGTTAAGCTAGCTGTGAAGCAACCTAGATTTGGTTGGTCTGGACACAGTCACAATAGCATTAAAACCATATCAGCCATTGATGCGGATGGAAAGCTTAGAATATACACACCAGCTGGGTCAAAAGCATGGATGTTGGATCCCTCAGAAGTTGAGTTAGTAGAGGAAGAGGAGATTCGCATTGGAGATTGGGTTCGGGTTAAGCCAACCGTTTCAACTCCAACCCACCAGTGGGGAGACGTAAATCATTCAAGCATTGGCATAGTGCATCGCATAGATGAAGGTGAACTGTGGGTTGCTTTCTGTTTCATGGAAAGGCTTTGGCTTTGCAAACCTTCTGAAATGGAGCGGGTTAGGCCATTTAAAGCTGGGGACAAAGTGAAGATCAAAGATGGATTGGTGACTCCAAGGTGGGGATGGGGAATGGAAACACATGCCAGCAAAGGGCATGTTATTGGGGTTGATGCAAATGGAAAGTTGAGAATCAAATTCCGGTGGCGAGAAGGGCGGCCGTGGCTCGGAGACCCCGCTGATATCGTTCTGGATGATAGTCCTAGAATGGGATCTTGA 4893 0.4551 MKVPCCSVCQTRYNEDERVPLLLQCGHGFCKECLSRMFSASPDTTLPCPRCRHVSVVGNSVQALRKNYAVLALIHSALNTSGGNFDCDYTDDEENGDEDEDNGDNEEHLVLRRRWCSRGSQASSSGGCGPVIEVGGLHELKLVSKIGEGRRAGIEMWTAVVGGGDGGRCRHHVAVKKVSVVDDMNLDWVQGKLENLRRASMWCRNVCTFHGALRMEGSFCLVIDRCYGSIQSEMQKNKGRLTLEQILRYGADIARGVAELHAAGVICMNLKPSNLLLDASGHAVVSDYGLSSILKKPSCRKARPECDSSKVHSCMECTMLNPHYAAPEAWEPVKKSLNLFWDDAMGISAESDAWSFGCTLVEMCTGSIPWSGLSAEEIYRAVVKARKLPPQYASVVGVGMPRELWKMIGDCFQFKAAKRPTFNAMLATFLRHLQEIPRSPPASPDNDLAKSSVANVLVPSPSSDSEISQGNPNHLHQLVSEGNLIGVRELLAKAASGNGNNSVNYLLEAQNADGQTALHLACRRGSAEIVEAILEYREANVDVLDKDGDPPLVFALAAGSPECVRSLINRGANVSSGLRDGLGPSVAHVCAYHGQPDCMRELLLAGADVHAVDDEGETVLHRAVAKKYTDCALVILESGGCSSMGILNSKKMTPLHLCVATWNVAVVKRWVEVATPKEVADAIDVKSPVGTALCMAAAVKKDHEIEARQLVRVLLAAGANPFALDTQHGRTALHAAAMANDVELVKVILDAGVDVNIRNGHGTTPLHVALARGANSCVELLLSAGADYNWQDDEGDNAFHIAADAAKMIRENLDWLIVMLRNSDAAVNVKNHRQVTLRDFLEMLPKEWISEDLMEGLIQRDVYLSPTIFEVGDWIKFKRTVTTPKYGWQGSGHKSVGFVQSVPDKDHLIVSFCSGDARVLANEVIKVIPLDRGQHVQLKADVAEPKFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVKEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLLELSYLPNPWHCEPEEVEPVSPFRIGDRVCVKRSVAEPRYLWGGETHHSVGRISEIESDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVPSPKYGWEDITRNSIGIIHSLEEDGDMGIAFCFRSKPFVCSMTDVEKVSPFEVEQVIHVMPSVSQPRLGWSNETPATVGKIVTIDMDGALNVKVAGRKSLWKVSPGDAERLSGFVVGDWVRSKPSLGNRPSYDWNSIGKESLAVVHSVQDSGYLELSCCFRKGKWITHYTDVEKVPSYKVGQYVQFRKGVVEPRWGWRGACPESKGVITSVHADGEVRVAFYGVPGLWRGDPADLEIEHMFEVGEWVRLKHDGSQWKSVMAGSIGVVQGIGYENEWDGNISVAFCGEQEKWVGPTSSLERVDMLMIGQRVRVKLAVKQPRFGWSGHSHNSIKTISAIDADGKLRIYTPAGSKAWMLDPSEVELVEEEEIRIGDWVRVKPTVSTPTHQWGDVNHSSIGIVHRIDEGELWVAFCFMERLWLCKPSEMERVRPFKAGDKVKIKDGLVTPRWGWGMETHASKGHVIGVDANGKLRIKFRWREGRPWLGDPADIVLDDSPRMGS* 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat profile. 761 793 IPR002110 GO:0005515
Pte15g01817 1630 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 82 IPR013083 -
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat profile. 547 579 IPR002110 GO:0005515
Pte15g01817 1630 Gene3D Transferase(Phosphotransferase) domain 1 226 456 - -
Pte15g01817 1630 Gene3D - 727 844 IPR036770 -
Pte15g01817 1630 Pfam Ankyrin repeats (many copies) 749 802 IPR002110 GO:0005515
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat region circular profile. 547 575 - -
Pte15g01817 1630 Gene3D - 581 726 IPR036770 -
Pte15g01817 1630 PRINTS Ankyrin repeat signature 514 529 IPR002110 GO:0005515
Pte15g01817 1630 PRINTS Ankyrin repeat signature 777 791 IPR002110 GO:0005515
Pte15g01817 1630 Pfam Ankyrin repeats (many copies) 585 632 IPR002110 GO:0005515
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat profile. 513 546 IPR002110 GO:0005515
Pte15g01817 1630 SUPERFAMILY Protein kinase-like (PK-like) 140 441 IPR011009 -
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat region circular profile. 728 759 - -
Pte15g01817 1630 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Pte15g01817 1630 Pfam RING-type zinc-finger 6 49 IPR027370 -
Pte15g01817 1630 SUPERFAMILY RING/U-box 5 57 - -
Pte15g01817 1630 SMART ring_2 6 51 IPR001841 -
Pte15g01817 1630 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1624 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Pte15g01817 1630 Pfam Protein tyrosine and serine/threonine kinase 140 427 IPR001245 GO:0004672|GO:0006468
Pte15g01817 1630 SMART ANK_2a 513 543 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 650 679 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 794 829 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 582 611 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 547 576 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 615 646 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 470 505 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 728 757 IPR002110 GO:0005515
Pte15g01817 1630 SMART ANK_2a 761 790 IPR002110 GO:0005515
Pte15g01817 1630 CDD RING-HC_KEG-like 3 59 - -
Pte15g01817 1630 Gene3D - 468 580 IPR036770 -
Pte15g01817 1630 ProSiteProfiles Protein kinase domain profile. 140 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat region circular profile. 761 793 - -
Pte15g01817 1630 Pfam Ankyrin repeats (3 copies) 492 575 IPR002110 GO:0005515
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat profile. 728 760 IPR002110 GO:0005515
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 913 987 IPR040847 -
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 1372 1492 IPR040847 -
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 993 1113 IPR040847 -
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 1245 1366 IPR040847 -
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 1119 1237 IPR040847 -
Pte15g01817 1630 Pfam Mind bomb SH3 repeat domain 1555 1619 IPR040847 -
Pte15g01817 1630 FunFam E3 ubiquitin-protein ligase KEG 453 683 - -
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Pte15g01817 1630 FunFam E3 ubiquitin-protein ligase KEG 227 443 - -
Pte15g01817 1630 ProSiteProfiles Ankyrin repeat region circular profile. 513 535 - -
Pte15g01817 1630 FunFam E3 ubiquitin-protein ligase KEG 727 860 - -
Pte15g01817 1630 SUPERFAMILY Ankyrin repeat 475 803 IPR036770 -
Pte15g01817 1630 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01817 Pte-Chr15 22893539 22905575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01817 729 835 MAP Kinase Kinase Kinase AT4G18950 32.432 2.46e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pte15g01817 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01817 K16279 - qsa:O6P43_001491 2820.03