Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01792 ATGGAGTCCAAAAGCTTTCAAAGATGCTGGCAGAAGATGAAGTCAGATTCAAAAAATTTTTGGAGGACTATAGTGTTTAAGCCAACCAGATTTTACTATGTAGATATTAAGAGGATTACCAATGGATTCAAGGAAAAGTTGGGTGAAGGGGCCAATGGAACTGTGTTTAAAGGTAAGCTTTCGAGTGACATAGTAGTGGCGGTGAAGATGCTCAACAATTCAAAGGGAGATGGGCAAGAATTCATCAACGAGGTTGGGACAATCGGAAAATCCACCACGTGA 282 0.4078 MESKSFQRCWQKMKSDSKNFWRTIVFKPTRFYYVDIKRITNGFKEKLGEGANGTVFKGKLSSDIVVAVKMLNNSKGDGQEFINEVGTIGKSTT* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01792 93 ProSitePatterns Protein kinases ATP-binding region signature. 47 69 IPR017441 GO:0005524
Pte15g01792 93 Gene3D Phosphorylase Kinase; domain 1 12 92 - -
Pte15g01792 93 SUPERFAMILY Protein kinase-like (PK-like) 20 87 IPR011009 -
Pte15g01792 93 Pfam Protein tyrosine and serine/threonine kinase 43 89 IPR001245 GO:0004672|GO:0006468
Pte15g01792 93 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 90 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01792 Pte-Chr15 21954756 21955037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01792 28 92 Receptor kinase-like Gene Family AT1G66980 48.485 1.93e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte15g01792 PK_Tyr_Ser-Thr 1.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01792 - - tpra:123893290 108.997