Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01789 ATGGACAATCTTAGAAGTTGTGCCAACTTCCTTGATAATGCTAAACCCTACATTGCCATGATATCCTTACAGTTTGGCTATGCAGGCATGAATATTATCACCAAAGTTTCTCTCAACCAAGGCATGAGCCATTATGTCCTAGTTGTCTATAGACATGCCTTTGCAACTGCTTCCATTGTTCCATTTGCATTTGTTTTTGAAAGGAAGGCGCAGCCAAAGATTACATTCCAAATTTTTATGCAAATCTTTGTGCTTGCTCTACTTGGGCCTGTGATTGATCAAAATTTCTACTATGCCGGATTGAAGTTTACATCACCTACTTTCTCTTGTGCAATGAGCAATATGCTTCCTGCCATGACTTTTGTGATGGCAGTCGTCTGCAGGATGGAGAAGATCAACATGAAGAAGATTAGGAGCCAAGCAAAGATAGTAGGAACACTAGTGACCGTTGCCGGGGCTATGCTGATGACCTTGTACAAGGGTCCCATCGTGGAAATGGTGTGGTCCAAGCATGCTCACTCAAATTCAACAAGTAATTCAGGAACCTCGGACAAAGACTGGTTCAAGGGGTCCATGTTTCTCATAATTGCTACTCTTGCATGGGCTTCTCTATTCGTATTACAAGCCAAAGCTATCGAGACATACAAAAACCATCAGCTGACTCTTACATCACTTGTGTGCTTTGTGGGCACTCTTCAAGCAATTGCAGTCACTTTTGTCACGGAGCACAAGACATCTGTCTGGAGAGTTGGCTGGGACATGAGCCTCCTTGCTGCTGCCTATGCTGGCATTGTGACATCAAGCATATCGTATTATGTACAAGGACTTGTAATAAAAGAAAAAGGACCAGTTTTTGCTACAGCCTTCAGTCCTTTGATGATGATCATTGTGGCCATTATGGGCTCCTTTATACTTGCAGAACAAATCTATCTTGGAGGGATCATTGGTGCTGTCTTGATTGTTATAGGTCTATATTCTGTGCTTTGGGGGAAACACAAGGAACGTATAGAAAATATAGGCATTGGAGATATACCGGTTGCTATCAAGCCTGAGCCAAGTTCATCAGTGTCAGCAATTGAAGCTATTGAAGTTGATGCCATCCCAATTAAAATGGTCATCTCCAATGCTCCAACGAAAACCAACCAAGACCAAAATGCCTAA 1161 0.4238 MDNLRSCANFLDNAKPYIAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIVPFAFVFERKAQPKITFQIFMQIFVLALLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVVCRMEKINMKKIRSQAKIVGTLVTVAGAMLMTLYKGPIVEMVWSKHAHSNSTSNSGTSDKDWFKGSMFLIIATLAWASLFVLQAKAIETYKNHQLTLTSLVCFVGTLQAIAVTFVTEHKTSVWRVGWDMSLLAAAYAGIVTSSISYYVQGLVIKEKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGIIGAVLIVIGLYSVLWGKHKERIENIGIGDIPVAIKPEPSSSVSAIEAIEVDAIPIKMVISNAPTKTNQDQNA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01789 386 PANTHER WAT1-RELATED PROTEIN 15 335 IPR030184 GO:0016020|GO:0022857
Pte15g01789 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Pte15g01789 386 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020
Pte15g01789 386 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020
Pte15g01789 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01789 Pte-Chr15 21611002 21613488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01789 1 335 Nodulin-like Gene Family AT5G07050 72.807 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01789 - - cit:102620980 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01789 15 21611002 21613488 Pte15g01789 15 21611002 21613488 RCT