Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01787 ATGAAACAACTTATACAACTCCCTAGCACTTTTCTTCTCGAAAATGGACTTGCTTCCGATCACCCGAGCTCCCCCAAAACCGAGCACTCGGAGGATAATGCCTCCTCTTCCACCACCGCCACCACTACTGCAGCAGTGACATCTGCTAACCCAAGCGGAAGGGCGCACGAGTGTTCTATCTGTCACAAGATTTTTCCAACAGGTCAGGCTCTCGGGGGTCACAAGAGGTGCCACTATGACGGTGGCAACCATAGCACAGGTGCTGTAACATCACCAGAGGGCGTGGCATTAGCAAATTCCCATATCCACCGTGGTTTTGACTTGAACCTTCCAACTCCTTTACTGGAATTGTCGCCAGTAATTGGCAGTGACTCTGTAAAATTTGCAAGAAAATTTTCAGAGGAACAAGAGGTGGAGAGTCCATTACCAGTTGCTAAGAAGCCTCATTTATTATTTGCTTAA 462 0.4784 MKQLIQLPSTFLLENGLASDHPSSPKTEHSEDNASSSTTATTTAAVTSANPSGRAHECSICHKIFPTGQALGGHKRCHYDGGNHSTGAVTSPEGVALANSHIHRGFDLNLPTPLLELSPVIGSDSVKFARKFSEEQEVESPLPVAKKPHLLFA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01787 153 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Pte15g01787 153 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 26 112 IPR044653 GO:0003700
Pte15g01787 153 SUPERFAMILY beta-beta-alpha zinc fingers 54 81 IPR036236 -
Pte15g01787 153 MobiDBLite consensus disorder prediction 13 53 - -
Pte15g01787 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 78 IPR013087 -
Pte15g01787 153 Pfam C2H2-type zinc finger 55 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01787 Pte-Chr15 21557084 21564241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01787 53 152 C2H2 Transcription Factor Family AT1G27730 50.962 4.44e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01787 - - gmx:100806788 128.257