Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01762 ATGCTACTAGCTAAAGTACAACCACAAGCACCTGCTGCTCTAGCACCCGTTCAAGATCATGAACTCACAAAGTATCCTTCTTCTGCTGCCTTGTTTGATGATTACCTCAACGAGCACTACTCCACAAATCTTAACCATGCGGAGCATGCTGCACTTGTGGACTGTAAGCAGCTCAATGAGCTCAATGTTGACTACTTAGAATCAGTATCAATTGTGATCAAGAGCAGCATTGCTAATGCATTGGAAGCTCTACTCACCAACATGACTCAATTGACCAGTGTGTCACTTGGGTTGGTGACTCAAGCTTTGCGCCGAAACTTGAAGAACAACAAGAAGCGTAATGTGTCTGACAATGGATCATCCACTGCTCACCCATTTAGGGAGCCACTTGAAAAACTCATCAAGGTAGTCCGCAAAGACCTATGCAAGCGAGCATTCAAATGCATGAGGGGTAAGGAGAGAATTCTTGAGGACGGAGGCAAAGGAATTCTTGTGAATGATGCAGTCACCGTTAGCCAAAATGGAACAGATAACTTCACTTCCATCAATTCTGCCATTGAATTTGTTCCTAACAACACAAAAGTCGAAGACGGGTATTTCGTAATCTACGTCAGAGAAGGAGTTTACGAGGAATATGTCGTTGTGTCCAAACAAAAGACGAACATTTTGATTGTCGGAGACGGCGTCAACAAGACCATCATCACAGGGAACCATAGTGTTGTTGATGGATGGACAACATTCAATTCCTCTACCTTTGCTGTGTCCGGTGAGAGATTTATAGCAGTGGACGTGACATTCAAAAATACAGCAGGTCTTGAAAAGCACCAAGCAGTGGCTGTGAGGAACAATGCAGATCTCTCAACATTCTACCGTTGCAGCTTTGAGGGCTACCAGGACACCCTTTATGCCCATTCTCTTAGACAATTTTATAGAGAATGTGACATATATGGCACTGTCGATTTCATATTTGGTAATGCTGCTGCAGTGTTCCAGACTTGCAATATATATGCCAGAAAACCATTGCCAAATCAGAAGAATGCCGTTACGGCGCAGGGCAGAACCGATCCAAACCAAACCACAGGGATCTCAATTCAAAACTGCACTATTGAAGCTGCACCAGATTTGGCTATGGACTTGAATTCTACCTTGAATTACTTGGGCAGACCATGGAAACAGTACGCAAGGACTGTGTACATGGAGTCATACATAGGAGAGCTTATCACTCCAGTTGGATGGTTGGAATGGAATGGAACAGTAGGGTTGGATACAGTTTACTATGGCGAGTACAGGAATCATGGACCTCGTGCTAACACAAGTGAGAGAGTTCGATGGCCTGGTTACAACTTGTTGAATGCAACACAAGCTCTGAACTTCACAGTCTACAATTTTACATTAGGAGACACATGGCTGCCTGACACTGACATACCCTTCGTTGGAGGCTTGATGGAACTAGATTTTTAG 1461 0.4401 MLLAKVQPQAPAALAPVQDHELTKYPSSAALFDDYLNEHYSTNLNHAEHAALVDCKQLNELNVDYLESVSIVIKSSIANALEALLTNMTQLTSVSLGLVTQALRRNLKNNKKRNVSDNGSSTAHPFREPLEKLIKVVRKDLCKRAFKCMRGKERILEDGGKGILVNDAVTVSQNGTDNFTSINSAIEFVPNNTKVEDGYFVIYVREGVYEEYVVVSKQKTNILIVGDGVNKTIITGNHSVVDGWTTFNSSTFAVSGERFIAVDVTFKNTAGLEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAAVFQTCNIYARKPLPNQKNAVTAQGRTDPNQTTGISIQNCTIEAAPDLAMDLNSTLNYLGRPWKQYARTVYMESYIGELITPVGWLEWNGTVGLDTVYYGEYRNHGPRANTSERVRWPGYNLLNATQALNFTVYNFTLGDTWLPDTDIPFVGGLMELDF* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01762 486 FunFam Pectinesterase 163 481 - -
Pte15g01762 486 Gene3D - 166 483 IPR012334 -
Pte15g01762 486 SUPERFAMILY Pectin lyase-like 165 480 IPR011050 -
Pte15g01762 486 ProSitePatterns Pectinesterase signature 2. 315 324 IPR033131 -
Pte15g01762 486 PANTHER PECTINESTERASE 45 471 - -
Pte15g01762 486 Pfam Pectinesterase 169 466 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01762 Pte-Chr15 19566487 19592179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01762 48 482 Carbohydrate Esterase AT3G10720 60.549 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01762 K01051 - qsa:O6P43_029776 667.151