Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01760 ATGATTGCTTCTCTATTCCAACCTGTTTCTGACACTACTGATGAAGGCATTATCAGAATGCTGCTGCAGGACTTTTATAGCAGTTCTCACAGTAGGAAACCTGAGCAGATTATCATTTTCAGGGATGGAGTAAGTGAATCACAGTTCAATCAAGTGTTGAACATAGAACTTGACCAGATAATCGAGGCCTGCAAATTCCTTGACTCCAGTTGGTCTCCGAAGTTCACTCTGATTGTGGCACAAAAGAATCATAATACTAGATTTTTCCAGCCCAACTCTGCTGACAATGTTCCTCCTGGAACCGTCATTGATAGTACCATATGCCATCCTAGGAACAACGACTTCTACTTGTGTGCTCATGCTGGAATGATAGGAACAACTAGGCCTACTCATTACCATGTGCTATACGATGAGCTTTGTTTTTCAACAGATGACTTGCAAGAGCTCGTGCATTCATTATCCTATGTGTACCAGAGAAGTACCACAGCCATATCAGTTGTTGCACCAGTCTGCTACGCTCACCTTGCAGCCTATCAAATGTCACAGTTTATTAAATTTGATGACATGTCTGAAAGTTCATCAAGCCATGGTGAGGTTGCTTCACCTGGTTCTGTCCACGTGCCCGAGCTACCCAAACTTCACAAGAATGTCTGCAATTCAATGTTCTTCTGCTGA 675 0.4281 MIASLFQPVSDTTDEGIIRMLLQDFYSSSHSRKPEQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDSSWSPKFTLIVAQKNHNTRFFQPNSADNVPPGTVIDSTICHPRNNDFYLCAHAGMIGTTRPTHYHVLYDELCFSTDDLQELVHSLSYVYQRSTTAISVVAPVCYAHLAAYQMSQFIKFDDMSESSSSHGEVASPGSVHVPELPKLHKNVCNSMFFC* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01760 224 Gene3D - 1 224 IPR036397 GO:0003676
Pte15g01760 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 15 187 - -
Pte15g01760 224 SMART Piwi_a_2 1 185 IPR003165 GO:0003676
Pte15g01760 224 SUPERFAMILY Ribonuclease H-like 17 183 IPR012337 -
Pte15g01760 224 ProSiteProfiles Piwi domain profile. 26 185 IPR003165 GO:0003676
Pte15g01760 224 FunFam Protein argonaute 3 1 224 - -
Pte15g01760 224 Pfam Piwi domain 16 185 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01760 Pte-Chr15 19527403 19528639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01760 8 225 Eukaryotic Initiation Factors Gene Family AT5G43810 45.415 2.45e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01760 K11593 - ming:122061577 372.859