Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01759 ATGGCTTCAATATGTAACCCCAAATGGATTGATCCTGCAAAGCAAAGAGGGACTTTGAAAGAGGATCCCCTAATTCCAAGTCCTCCACCTACTCCTCCAAAAGTTATTGCCATGCGAGCAAAATCTGTACAACCTGAGGTTGCCAAGAGAACATGCACCCCAAAACGTTTGCCAATGGCACGGAGGAGCCTTGGAACAAGAGGCAATAAAATTAACCTCATGACCAACCACTTCCAGATTCGAGTGTCCAAGCCTGACGGCGTTTTCTATCACTACAGTGTTGCCATTTTTTACGAAGACAAAAATCCAGTTGATGCATCCAAAGGTATTGGCAGAAAGATCATGGACAAGGTCTACGAGACATACAAGAGTGAGCTAGCGCATAAAGACTTCGCCTATGACGGTGAAAAGAGCTTGTTCACCGTTGGTCCTCTTCCGCAGAACAAGCTTGAATTCACCATTATTTTGGATGACATGATGTCAAACAAGGTTGGGAGGGATAGCAGCCCCGGGCCCGATGGTGATAAAAGTGGAGGTGACAGGAAGAGATTGAGGCGCCAATCTCATTCCAAAACTTTCATAGTTGAGATCAGCTATGCTGCCAAAATTCCCCTTCAAGCTATTGCGGACGCCTTGCGGGGTAGAGAGTCGGAGCATTCCCAAGAAGCACTGAGAGTTCTGGACATTATATTGAGACAGAATGCAGCAAAGCAGGGTTGTCTTCTGGTCCGGCAATCTTTCTTTCAAGACAGACCCTGTAATTTCAATGATCTGGGAGGTGGGGTTTTACGTTTCCGAGGTTGCCATTCAAGTTTTAGAGCCACACAAGGGGGTCTCACTCTCAACTTGGATATGTCCTCAACAATGATTTTACGCCCTGGACCGGTATTAGACTTCCTGATTTGTAATCAAAATGTTAGGAGTCCTGATCAAATCGACTGGAAAAAGGCCAGAAAGATGCTTAAGAACCTGAGAATCAAGACCAACAACATGGAGTACACGATTGCCGGACTAAGTGATAAACCATGCAAGGATCAGACGTTTGCAATGAGGCTGCGTGGTCAATTGGATAAGAAAACAGTTGAGATTACTGTTTATGAATACTATCGTTCTTTCAAGCATATAGAGCCATATGATTCAGCCTACATGCCATGCATTACTGTTGGAAAGAAAAACCGCCCAACTTATTTTCCCATGGAGTTCTGCACCTTGGTTTCTCTGCAACGTTATACAAAGGCTTTGACAGTCCCTCAAAGGGCTACATTAGTAGAGGTGTCAAGGCAGAAGCCTCAGGAGCGCATGAAAGCTTTGTCTTTCTCACTTAGGGACACCACATATGCATCTGATCCTATGCTTAATTCACTTGGGATTTCGATTAACAGTCAATTCACTCATGTCGAAGGCCGTGTTCTGCAAGCCCCAAGACTTCGAGTTGGAAACGGAGAAGACTTCTTTCCTCGAAATGGAAGGTGGAATTTCAACAACAAGACATTGGTTGATCCTGTGAAAATAGAGCGTTGGGCTATTGTGAATTTCTCAGCTCGCTGTGATACAAGAAACTTGGTCAATGAGATGATGAAGTCTGGAGAAAAGAAAGGCATTCGTGTAAGTCCTCCTTTTACTGTTGTTGAAGAGAATCCTCAGTTCAGACGTGAACAACCTACTGTGAGGGTAGAGAAACTGTTTGAAGCTCTAAAGGCCAAGCTTCCTGGCCCTCCACAATTTTTGCTATGCATCCTACCTGAGAGAAAGAACTCAGACATTTATGGCCCTTGGAAAAGGAAAAATCTTTCAGAAATGGGAATTGTAACCCAATGCATTGCACCAACAAGAGTCAATGACCAATACCTCACAAATGTGCTCCTCAAAGTCAATGCTAAGCTTGGTGGAATGAACTCTGTTCTTACTGTTGAGCGCAATCTACCACTAGTATCGCAATCCCCCACGCTCATTATTGGTATGGATGTCTCACATGGTTCACCAGGTCGATCAGATGCTCCATCTGTTGCTGCGGTATCATTTTCCACTTCACCTTTTGTCTGA 2043 0.4444 MASICNPKWIDPAKQRGTLKEDPLIPSPPPTPPKVIAMRAKSVQPEVAKRTCTPKRLPMARRSLGTRGNKINLMTNHFQIRVSKPDGVFYHYSVAIFYEDKNPVDASKGIGRKIMDKVYETYKSELAHKDFAYDGEKSLFTVGPLPQNKLEFTIILDDMMSNKVGRDSSPGPDGDKSGGDRKRLRRQSHSKTFIVEISYAAKIPLQAIADALRGRESEHSQEALRVLDIILRQNAAKQGCLLVRQSFFQDRPCNFNDLGGGVLRFRGCHSSFRATQGGLTLNLDMSSTMILRPGPVLDFLICNQNVRSPDQIDWKKARKMLKNLRIKTNNMEYTIAGLSDKPCKDQTFAMRLRGQLDKKTVEITVYEYYRSFKHIEPYDSAYMPCITVGKKNRPTYFPMEFCTLVSLQRYTKALTVPQRATLVEVSRQKPQERMKALSFSLRDTTYASDPMLNSLGISINSQFTHVEGRVLQAPRLRVGNGEDFFPRNGRWNFNNKTLVDPVKIERWAIVNFSARCDTRNLVNEMMKSGEKKGIRVSPPFTVVEENPQFRREQPTVRVEKLFEALKAKLPGPPQFLLCILPERKNSDIYGPWKRKNLSEMGIVTQCIAPTRVNDQYLTNVLLKVNAKLGGMNSVLTVERNLPLVSQSPTLIIGMDVSHGSPGRSDAPSVAAVSFSTSPFV* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01759 680 Pfam N-terminal domain of argonaute 70 231 IPR032474 -
Pte15g01759 680 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 50 675 - -
Pte15g01759 680 Pfam Piwi domain 576 675 IPR003165 GO:0003676
Pte15g01759 680 Pfam Argonaute linker 2 domain 432 477 IPR032472 -
Pte15g01759 680 ProSiteProfiles Piwi domain profile. 575 672 IPR003165 GO:0003676
Pte15g01759 680 ProSiteProfiles PAZ domain profile. 333 406 IPR003100 GO:0005515
Pte15g01759 680 Pfam Argonaute linker 1 domain 243 290 IPR014811 -
Pte15g01759 680 Pfam PAZ domain 297 422 IPR003100 GO:0005515
Pte15g01759 680 Gene3D - 470 636 - -
Pte15g01759 680 SMART DUF1785_2 241 293 IPR014811 -
Pte15g01759 680 Gene3D paz domain 287 410 - -
Pte15g01759 680 Gene3D - 637 680 IPR036397 GO:0003676
Pte15g01759 680 Pfam Mid domain of argonaute 486 566 IPR032473 -
Pte15g01759 680 SUPERFAMILY PAZ domain 288 437 IPR036085 GO:0005515
Pte15g01759 680 CDD PAZ_argonaute_like 293 405 - -
Pte15g01759 680 SUPERFAMILY Ribonuclease H-like 466 675 IPR012337 -
Pte15g01759 680 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01759 Pte-Chr15 19523618 19527212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01759 56 675 Eukaryotic Initiation Factors Gene Family AT1G48410 32.666 3.84e-88 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01759 K11593 - vvi:100241029 860.522