Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01753 ATGAGAGAGACCCAGGTAAAGAGGTCTCCTCCTGCCGCTTCTTCTTCCTCGTCATGTTCCTCTGTTGGGTTTGACAACACTCCAGAAAAATCAGTCAAACCCAGGCCTAAACGTTCCAGGACTCATCAAACTCCTCAGACATGTGATCTAAACAATCCCAATAGTACCATAAGCTCTGCCACAAACAGAAGAAGCTCAATATACAGAGGTGTCACCAGCAGACATAGATGGACTGGGAGGTTTGAAGCTCACCTCTGGGATAAGAGTTGTTGGAACAGTTTTCAAAACAAAAAAGGACGACAAGGGGCATATGACAGTGAAGAGGCTGCTGCTCGTACCTACGACCTTGCGGCCCTTAAATATTGGGGCCCCGGGACAACCTTGAATTTTCCGATAGAATTGTACACAAAGGAGCTTGAGGAAATGGAGAAGCTAAGTAAGGAAGAGTATTTAGCCACATTAAGAAGGCAAAGCAGTGGGTTTTCTAGAGGGGTTTCTAAGTATCGTGGGGTTGCAAGGCATCATCATAATGGGAGGTGGGAAGCAAGAATTGGAAGAGTATTTGGAAACAAGTACCTCTACTTAGGAACATATAATACTCAAGAGGAGGCAGCAGCAGCATATGATTTGGCAGCCATAGAATACAGAGGACCAAATGCAGTAACCAATTTTGACATTAGCAACTATATTGACAGATTAAAGAACAAGATTCCCTCTGCTGACAGATACCAAGAAACAGAGACAGAGACACAAGCAGAGTCAGCCCCCATTTCCTCTTCTGAATCAGAGGAAACAGAAGTAGATCAACAAACAAATCAACCGACTCCAGAACAAGAGCAGCTGGAGGCAAGTGAGGAAATACTAAAAGAACCAAAGCGTGAGAGAGAATCCCCAGAACTTGAATATGCCCAAATGCCATCTTGCATGGAAGAGTCATCCATGTCTGTCATGGAACCTGTGGTGGACAATGACCTCACTTGGAGTTTCATGGATGCGGGGTTTACTCAATTTCAAGTTCCATTAGACATGCCTTTGGATAAAACAGGGGAGCTGCTGGATGTGTTTGACAACAGAGGCTTTGAAGAAAATATTGATTTCCTATTTGGATTGGATTCCAATGAGAATGATTTTGACTTGAATAAAATCTTGGAAGGTGAGCAGGACTTGGGTAATAATTCAAACAGTGTGGTAAATAATGAGCAAGAGGAGAGGTCGTTGTCTTTGTCTTCACCATCTTCCATTCCTTCTTCAACTGGTTCTCCTTCTTCTTCAACAACTTCAGTCTCTTTCAGCTTAGAGGTGGGTGTGTATCGTGGAGTGAGGACTGCTCAGTTTGCTAGAGCTTCAATAGTGTTTTGGTGGATTTTATAA 1371 0.434 MRETQVKRSPPAASSSSSCSSVGFDNTPEKSVKPRPKRSRTHQTPQTCDLNNPNSTISSATNRRSSIYRGVTSRHRWTGRFEAHLWDKSCWNSFQNKKGRQGAYDSEEAAARTYDLAALKYWGPGTTLNFPIELYTKELEEMEKLSKEEYLATLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDLAAIEYRGPNAVTNFDISNYIDRLKNKIPSADRYQETETETQAESAPISSSESEETEVDQQTNQPTPEQEQLEASEEILKEPKRERESPELEYAQMPSCMEESSMSVMEPVVDNDLTWSFMDAGFTQFQVPLDMPLDKTGELLDVFDNRGFEENIDFLFGLDSNENDFDLNKILEGEQDLGNNSNSVVNNEQEERSLSLSSPSSIPSSTGSPSSSTTSVSFSLEVGVYRGVRTAQFARASIVFWWIL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01753 456 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pte15g01753 456 MobiDBLite consensus disorder prediction 388 427 - -
Pte15g01753 456 SUPERFAMILY DNA-binding domain 66 133 IPR016177 GO:0003677
Pte15g01753 456 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 40 294 - -
Pte15g01753 456 MobiDBLite consensus disorder prediction 41 60 - -
Pte15g01753 456 MobiDBLite consensus disorder prediction 249 280 - -
Pte15g01753 456 CDD AP2 66 132 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
Pte15g01753 456 ProSiteProfiles AP2/ERF domain profile. 67 131 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Pte15g01753 456 MobiDBLite consensus disorder prediction 241 300 - -
Pte15g01753 456 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 MobiDBLite consensus disorder prediction 282 300 - -
Pte15g01753 456 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Pte15g01753 456 Gene3D AP2/ERF domain 67 133 IPR036955 GO:0003700|GO:0006355
Pte15g01753 456 MobiDBLite consensus disorder prediction 1 60 - -
Pte15g01753 456 MobiDBLite consensus disorder prediction 8 27 - -
Pte15g01753 456 Pfam AP2 domain 166 217 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 Pfam AP2 domain 68 123 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Pte15g01753 456 SMART rav1_2 67 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01753 Pte-Chr15 19029792 19033554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01753 102 368 AP2-EREBP Transcription Factor Family AT3G54320 57.246 2.15e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte15g01753 AP2 3.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01753 - - qsa:O6P43_029788 403.675