Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01740 ATGCCAGTAAGTGTAAGTGGCTTTCAGAGCTTGGTAATTTTAGCTCTTGGAAACTGTGGTCTTCAAGGGCAAATCCCTGCATGGATATCGAAATGTAGGAGTTTAGAGGTTCTTGATTTATCGTGGAATCATTTAGGGGGTAGCATACCCCCTTGGATTGGTCATATGGGAAGTTTGTTTTACTTGGATCTCTCAAATAATTCTCTAACAGGATATATACCGACAAGCTTTGCAGATTTGAGAAATCTAATCTCTACAAATTGTAGTAAATCCAATTTTGCTGCATCTGCTGGCATTCCTCTTTTTGTGAAGAGAAACCAGAGTGCCAATGGCCTTCAGTATAACCACGCATCCAGTTTTCCTCCGTCAATTTTCTTGAACAACAACAGGCTGAGCGGGATAATATTTCCCGACATTGGTCAGTTGAAAGGACTGCATGTATTGGATTTGAGCAAGAATAATTTAACTGGTACCATTCCCAGTTCCATCTCAGAGATGGAAAATCTGGAGGTATTGGATTTGTCTAGCAATATTCTAGATGGATCCATCCCTTCGTCTTTTAACAAGCTCACGTTCTTGTCAAAGTTCAATGTGGCATACAACCACTTGCAGGGTGAAATTCCAACTGGGGGACAGTTTTTAAGCTTTCCTACCTCGAGCTTCGAGGGAAACCTCGGACTTTGTGGGGAAACATATTCTTCTTGTAAGGAGGCAATTGGGTCCGTGGGGTTGAAGTCTCACGTGGTTGGTTCAGTCAATAAGTTTGGTAGAGTGAACATTGTTGGGATTATGATCAGTGTGGTAATTGCAGTGGCATTACTCGCTGCAGTTGTTATTCTCAAAATATCGAGAAGGGATATAGGCGATCCAATTACTGGCTTTGATGAGGAATCCAGTAGTCCGAATAAGCTGTCTGAAGCACTTGGCTCTTCGAAGTTGGTTCTCTTTCAGAATTCAGATTGTAAGGATCTCACGGTTGCAGAATTGTTGAAATCTACAAACTATTTCAACCAGGCTAACATAATCGGTTGCGGTGGATTTGGCCTGGTTTACAAAGCCAACCTTCCTAATGGCACCAAAACTGCAATTAAAAGACTTTCTGGAGATTGCGGTCAAATGGAACGCGAATTTCAGGCGGAAGTGGAGTCCCTCTCAAGAGCTCAGCATAAGAACCTTGTTTCTCTCAAAGGCTATTGCCAACATGGCAATGACAGGTTGTTAATATACTCCTACTTGGAGAATGGAAGCTTGGATTATTGGTTGCATGAGTGTGTGGATGGAAGTTCAGTTCTAAAATGGGATACAAGGCTAAAGATAGCGCAAGGTGCAGCTCATGGTTTAGCTTACTTGCACAAGAGCTGTGAGCCTATTATAGTTCATCGCGATGTAAAATCGAGCAACATACTCCTGGATGAAAGATTTGAAGCCCATTTGGCTGATTTTGGTCTCTCAAGGCTACTTCAGCCTTACGATACTCACGTGACAACAGATTTGGTCGGTACTTTAGGTTACATTCCTCCAGAGTATAGTCAAACATCAACAGCAACATGCAGGGGTGATGTTTACAGTTTTGGTGTTGTTCTTCTTGAGCTGCTCACTGGTAGAAGGCCTGTAGAGGTTTGCAAAGGCAAAAACTGCAGAGATATCGTGTCTTGGGTGTTTCAGATGAAATCTGACAACAGGGAGGATGAAGTTTTTGATTCAGCCATTTGGCATAAGGATCACAAGAAGCAACTGTTGGATGTGCTGACTATTGCTTGCAAATGCATCAATCAAGATCCCCGAAAGAGGCCCTCTATCGTAGAAGTTATGTCTTGGCTTGATGGTGTGCGTGCAAGTGAATCATAA 1848 0.4253 MPVSVSGFQSLVILALGNCGLQGQIPAWISKCRSLEVLDLSWNHLGGSIPPWIGHMGSLFYLDLSNNSLTGYIPTSFADLRNLISTNCSKSNFAASAGIPLFVKRNQSANGLQYNHASSFPPSIFLNNNRLSGIIFPDIGQLKGLHVLDLSKNNLTGTIPSSISEMENLEVLDLSSNILDGSIPSSFNKLTFLSKFNVAYNHLQGEIPTGGQFLSFPTSSFEGNLGLCGETYSSCKEAIGSVGLKSHVVGSVNKFGRVNIVGIMISVVIAVALLAAVVILKISRRDIGDPITGFDEESSSPNKLSEALGSSKLVLFQNSDCKDLTVAELLKSTNYFNQANIIGCGGFGLVYKANLPNGTKTAIKRLSGDCGQMEREFQAEVESLSRAQHKNLVSLKGYCQHGNDRLLIYSYLENGSLDYWLHECVDGSSVLKWDTRLKIAQGAAHGLAYLHKSCEPIIVHRDVKSSNILLDERFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTSTATCRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDIVSWVFQMKSDNREDEVFDSAIWHKDHKKQLLDVLTIACKCINQDPRKRPSIVEVMSWLDGVRASES* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01740 615 Gene3D Phosphorylase Kinase; domain 1 298 411 - -
Pte15g01740 615 Gene3D Ribonuclease Inhibitor 1 239 IPR032675 -
Pte15g01740 615 Pfam Leucine rich repeat 33 83 IPR001611 GO:0005515
Pte15g01740 615 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515
Pte15g01740 615 PRINTS Leucine-rich repeat signature 166 179 - -
Pte15g01740 615 PRINTS Leucine-rich repeat signature 59 72 - -
Pte15g01740 615 Gene3D Transferase(Phosphotransferase) domain 1 412 614 - -
Pte15g01740 615 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Pte15g01740 615 CDD STKc_IRAK 342 609 - -
Pte15g01740 615 FunFam Leucine-rich repeat receptor-like protein kinase 412 615 - -
Pte15g01740 615 ProSiteProfiles Protein kinase domain profile. 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01740 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pte15g01740 615 SUPERFAMILY L domain-like 5 230 - -
Pte15g01740 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 608 - -
Pte15g01740 615 Pfam Protein kinase domain 337 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01740 615 FunFam Phytosulfokine receptor 1 299 411 - -
Pte15g01740 615 FunFam Tyrosine-sulfated glycopeptide receptor 1 1 239 - -
Pte15g01740 615 SMART serkin_6 336 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01740 615 SUPERFAMILY Protein kinase-like (PK-like) 318 607 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01740 Pte-Chr15 18106141 18108528 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01740 11 610 Receptor kinase-like Gene Family AT5G07280 38.250 3.00e-115 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte15g01740 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01740 - - qsu:111992608 943.725