Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01717 ATGGGTTGCGTCTGTTGCAAGCCCGCTGCTATTGACGATAGCAAAGATAGTCCAAGAGAGCGATTATCTAGCAAAGGTTCATTAGACTCACGGGCACATACAGTTAATACATTAAGAAGGGAAGACGCTTATATACCTAAGGATCGATATGAGGGTAATGATGGCAGAGCTGCATTGATTGAGAAACACGCCAATGGTTCTGTTCGGTTACATGGTGAGCATTTTGATAGGAAGAGGGAGAAGATGGAGTTTGTTGTTGCTCACCATCCAGGAGCTGGGACGGTTCCAAAAGCCACTGAAGGGGAGCATATTGCAGCTGGGTGGCCCTCATGGCTTGCTACAGTGGCTGGGGAGGCTATCCAGGGTTGGTTACCGCGACGGGCAGATTCTTTTGAGAAACTGGATAAGATTGGTCAGGGAACTTATAGCAACGTCTACAGGGCTCGCGATCTTGAGCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGGTTTGACAACTTAGAGCCTGAGAGTGTTCGCTTTATGGCAAGGGAAATCCACATTCTACGCAAACTTGATCATCCAAATGTGATAAAACTTGAAGGTCTTGTTACATCAAGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTACATGGAACATGACTTAGCTGGGCTTGCTTCACACCCTGGTGTGAAGTTCACTGAAGCACAGGTTAAGTGTTATATGCGGCAACTTCTGCTTGGACTTGATCATTGTCATAGTCGTGGTGTCCTCCATCGTGATATTAAGGGTTCTAATCTCTTGATTGACAATAATGGGATCTTGAAGATTGCAGACTTTGGTCTTGCGAGTGTTTTTGATCCCCTACAAAGGCAACCGCTAACTAGTCGGGTTGTGACTCTTTGGTACCGTCCGCCAGAGCTTTTGCTTGGAGCCACTTATTATGGTCCTGCTGTTGATTTGTGGAGTACAGGTTGCATACTTGCTGAGTTGTATTCTGGAAAGCCTGTTATGCCAGGAAGAACTGAGGTGGAACAGTTGCATAAAATTTTTAAACTCTGTGGTTCCCCTTCAGAGGATTACTGGAGAAAATCTAAATTGCCTCATGCTACTATCTTTAAACCTCAACAGCCATATAGACGGTGTGTCGCAGAAACATTTAAGGAATTCCCTGCACCGGCATTAGCTCTTATGAACATTTTACTCTCCATAGACCCTGCTGATCGTGGAAGTGCAGCTTCTGCTTTGAATAACGAGTTCTTCACAACAAAACCACTGCCTTGTGATCCTGCAAGCTTACCTAAGTATCCTCCTAGCAAAGAGCTTGATGCAAAAGTGCGAGATGAAGAGGCTAGAAGACAAGGTGCAGTAGGAAGCAAGGGCCAAAAAGCAGACCCTGACAGAAGAGGAGCAAAGGAATCTCGAGCAATCCCAGCACCGGATGCTAATGCTGAATTAATGCTATCGATGCAGAAGAGACAAGGTCATCCTAATTCTAAGAGCCGCAGTGAGAAGTTTAATCCTCATCCTGAAGATTCTGCATCAGGATTTCCAATAGATCCACCTCGGCCATCACAAACTACAGAAGTAGGTGGAGATTCCCAAGCACAGCAACATAAAAGAGCTTCCCACTCTGGACCACTTGTTCACCGCACTGCTTGGGCAAAATCTGTGAAGAACCAGGATGATGCTCCCAAGGTTTCTTCTGGCGCTGACTTGTCTGCCATGCCTGGTTTTGTGGCAGCCAGGAGGAGTGCCTTATGTGAAGACCGGAGAGCCAGGTCTGGTTCTTCTCAACTAGAAGTTCCAAAGCTAATTGGTAGGTTCCCTGGATCCTTCAAAGAGGGTCCTGAACAATTGCCACTGCAGGCTCCAAAGCATCTGACACAAGGTGTTATTAGCTTTAACCAAAAGGACGATGGGAGAAGTGGCAACAAAGATTCAACTCTGGTTGGTTATGGATCCAAGGGCCATAAGATACATTATTCTGGTCCATTGTTAGTTTCAGGCAACATGGACCAGATGTTGAAGGATCATGACCGGCATATCCAAGAAGCTGTGAGACGTGCAAGACTTGACAAGGCAAAGGTGAGAAGAGTTCAGGCGGAAGGGAACCAAGTAACTACCAGTTCATTAATCGTATCTGGCAGGTAA 2136 0.4574 MGCVCCKPAAIDDSKDSPRERLSSKGSLDSRAHTVNTLRREDAYIPKDRYEGNDGRAALIEKHANGSVRLHGEHFDRKREKMEFVVAHHPGAGTVPKATEGEHIAAGWPSWLATVAGEAIQGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRKLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMRQLLLGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASVFDPLQRQPLTSRVVTLWYRPPELLLGATYYGPAVDLWSTGCILAELYSGKPVMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKEFPAPALALMNILLSIDPADRGSAASALNNEFFTTKPLPCDPASLPKYPPSKELDAKVRDEEARRQGAVGSKGQKADPDRRGAKESRAIPAPDANAELMLSMQKRQGHPNSKSRSEKFNPHPEDSASGFPIDPPRPSQTTEVGGDSQAQQHKRASHSGPLVHRTAWAKSVKNQDDAPKVSSGADLSAMPGFVAARRSALCEDRRARSGSSQLEVPKLIGRFPGSFKEGPEQLPLQAPKHLTQGVISFNQKDDGRSGNKDSTLVGYGSKGHKIHYSGPLLVSGNMDQMLKDHDRHIQEAVRRARLDKAKVRRVQAEGNQVTTSSLIVSGR* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01717 711 CDD STKc_CDK9_like 131 415 - -
Pte15g01717 711 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Pte15g01717 711 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Pte15g01717 711 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Pte15g01717 711 MobiDBLite consensus disorder prediction 421 566 - -
Pte15g01717 711 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
Pte15g01717 711 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01717 711 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Pte15g01717 711 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01717 711 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Pte15g01717 711 MobiDBLite consensus disorder prediction 434 469 - -
Pte15g01717 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Pte15g01717 711 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Pte15g01717 711 MobiDBLite consensus disorder prediction 521 536 - -
Pte15g01717 711 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01717 Pte-Chr15 17720268 17725060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01717 123 457 Core Cell Cycle Gene Families AT5G10270 53.561 5.51e-118 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte15g01717 Pkinase 2.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01717 - - pvy:116107610 1184.47