Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01696 ATGGAGAGTACTGATTCTTCAACCACCTCACAACAGCCTAACCTCCCTCCCGGCTTCCGCTTCCACCCCACCGACGAGGAACTTTTGGTCCACTACCTTAAGAGAAAAGCCTCTTCTGCTCCTCTACCTATTGCCATAATCGCCGAGATTGATCTTTACAAATTTGACCCATGGGAGCTTCCAGCTAAGGCGAGTTTTGGAGAGCAGGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTACCCAAATGGTGCGAGGCCGAACCGGGCAGCGACGTCCGGTTACTGGAAGGCGACCGGAACTGATAAGCCGGTTTTAACCTCTGGTGGGACTCAAAAGGTGGGGGTGAAGAAAGCTTTGGTGTTTTATGGAGGGAAGCCACCTAAAGGTGTGAAGACTAATTGGATCATGCACGAGTACAGGCTTGCTGATAATAAGACCAACGTTAAGCCACCTGGATGTGACTTGGGTAACAAGAAAAACTCTTTGAGGCTTGATGACTGGGTACTATGTCGAATCTACAAGAAAAACAATACGCACAGATCAGCTATGGATCACGACAGGGATGAGACGATTGATGATATGATGGGAGTGATACCTCCATCGATCGACGTGGGCCAAATAAATATGAGACTGCAGCTTCCAAAGCTGTCCACAACCTATGCAGGTGCACTGTTAGAGAATGAGCCAAATTTAATGGAGAGCATAATAAGCCATAGTGGGATGAACACGTGTGCCATTACATCTCCATTGGCCAAGAGTACAGAGCAGCTTCCTCAAGTCCTCACCCTAACCAACACTTCAAACTCCCTGCCACCAAAGAGAAGGCTCACTTCTTTGTGTTGGGATGATCATGATCATCAGAACATGGCTGGGGATGCAGGAGCATCGGGAAATAAGAGAGTGGGTATGGATAATGATGATGGCAGTGTGGTAAGGGCAGAGGAAACTGGTACGGCTAATTCCTTTGCCACTTTCCTCACCCAGCTTCCACAGACTCCTTCATTACACCAACAGCACACAATGCTTGATTCTGTTGGGGATGGACTCCTTCGGCAACCATATCATCAGTTTCAAGGAATGAACTGGTACTCCTAA 1098 0.4791 MESTDSSTTSQQPNLPPGFRFHPTDEELLVHYLKRKASSAPLPIAIIAEIDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNKTNVKPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSAMDHDRDETIDDMMGVIPPSIDVGQINMRLQLPKLSTTYAGALLENEPNLMESIISHSGMNTCAITSPLAKSTEQLPQVLTLTNTSNSLPPKRRLTSLCWDDHDHQNMAGDAGASGNKRVGMDNDDGSVVRAEETGTANSFATFLTQLPQTPSLHQQHTMLDSVGDGLLRQPYHQFQGMNWYS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01696 365 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01696 365 MobiDBLite consensus disorder prediction 1 17 - -
Pte15g01696 365 PANTHER NAC TRANSCRIPTION FACTOR 56 15 218 - -
Pte15g01696 365 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pte15g01696 365 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Pte15g01696 365 FunFam NAC transcription factor 56 24 181 - -
Pte15g01696 365 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Pte15g01696 365 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01696 Pte-Chr15 17389836 17391439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01696 1 365 NAC Transcription Factor Family AT3G15510 52.480 1.09e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01696 NAM 1.6e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01696 - - qsa:O6P43_000935 535.028