Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01683 ATGTATGCAGATCAGGAATTAAGAAAGCTTGGAGATTTTAAGTTCGGCCCAGACCATATTCAAGTTATCTGTGGCTGTACTGGAAAAAATGTCGGAGATATCACTGCAACACTCAAGGTCGATTTCACAGGAAAATTTGAGATCATCCATTGCACCTGTCCAACTTGTTCAACTTTAGCAGAACCAGGGGAAAGACTAACTCCATTTGACTTTGAGAACCATTGTGGTCGTGACGGTCTCAGAGACTGGAAAAAAAGCATCTGGGTTTATATGTATAATGGTGACAAGTTTGAGAAGGTGGCACTTCTGAAGAGTCCTGTGCTGAAATACTACAGGCATGGTACTAACATTTTGAATTGGGAGAGTGTGACTTATTGCAAGCGAAACTATCATAGAGATGAATTTGTTCGTTGCTCAAAATGCAACAAAGAGCGCAGGTTTACCCTTCACAACAAGGAACACATTGAAATTTACCATGAAGCTTTGTTAAATGAAAAATGGGAATGTGCTGATTGGAAATCTGCTGATGACGAAAATGCCAAGTAA 546 0.3993 MYADQELRKLGDFKFGPDHIQVICGCTGKNVGDITATLKVDFTGKFEIIHCTCPTCSTLAEPGERLTPFDFENHCGRDGLRDWKKSIWVYMYNGDKFEKVALLKSPVLKYYRHGTNILNWESVTYCKRNYHRDEFVRCSKCNKERRFTLHNKEHIEIYHEALLNEKWECADWKSADDENAK* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01683 181 SUPERFAMILY SAND domain-like 60 89 IPR010919 -
Pte15g01683 181 ProSiteProfiles SAND domain profile. 20 109 IPR000770 GO:0003677
Pte15g01683 181 PANTHER PROTEIN ULTRAPETALA 1 1 174 IPR020533 -
Pte15g01683 181 Pfam SAND domain 48 89 IPR000770 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01683 Pte-Chr15 17222207 17222883 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Pte15g01683 SAND 2.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01683 - - csv:101215392 159.458