Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01682 ATGTTTACTGTGACATTAACTGTCGGTGATACTGAACTGAAGAATGCACATCTGGTGATTCCTAAGAAATATGCTGAGGCATTTTTTCCAAAAGTTTCCGAGCAGCAAGGAGTTCCAGTTTCTGTTCAGGATACCGAAGGCAAAGATTGGAATTTTCAGTTCCATTTTTGGGGCAATTTTAATGGAAAAAACCATGTGTATAGTTTAGAAGGACTTAGAGATTATATGGTCGCAATGCAGTGGCAACCCGGTGACGCAGTCGAGTTTTTAAGTAAAGAACCAGAAGGGAAGATGGTGATAGATACAAAAAAGGCTTCTGATTCTGCCGTTCAACTATCTTTGGAGGTAATGCGTGATAATTAA 363 0.3939 MFTVTLTVGDTELKNAHLVIPKKYAEAFFPKVSEQQGVPVSVQDTEGKDWNFQFHFWGNFNGKNHVYSLEGLRDYMVAMQWQPGDAVEFLSKEPEGKMVIDTKKASDSAVQLSLEVMRDN* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01682 120 Pfam B3 DNA binding domain 11 101 IPR003340 GO:0003677
Pte15g01682 120 SMART B3_2 2 106 IPR003340 GO:0003677
Pte15g01682 120 CDD B3_DNA 1 100 IPR003340 GO:0003677
Pte15g01682 120 SUPERFAMILY DNA-binding pseudobarrel domain 1 100 IPR015300 -
Pte15g01682 120 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 2 109 - -
Pte15g01682 120 ProSiteProfiles B3 DNA-binding domain profile. 3 106 IPR003340 GO:0003677
Pte15g01682 120 Gene3D - 1 109 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01682 Pte-Chr15 17203860 17204933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01682 1 106 B3 DNA Binding Superfamily AT4G21550 44.340 3.25e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte15g01682 B3 2.2e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01682 - - zju:107430193 129.798