Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01679 ATGGGTTTTGATGATCCTTGTAAACTTGCATTAGGGTTAGGCGGCTTAGCTACCTCAGCAGATGGATTAGTTTCATCAGCAAAAATATATAGTCACAATCGTACCAGCGATTTAAACAAGTGCAGCTTCAGTTTCGCAGCAACCGGTGCGGGTGTCGAGCCATCTTTGAAATTGAGTCTCTCCGGTGAGAGCTACCCTGTAGTGTCTAGAAAGATTGATGTGAGCGTGAATAAAGGTGGTGAGGAATTTTTTGAGATGAATCGCCAAGGTTCACCACACAGCAGTACTGCAGTTTCCTCCTTCTCCAGTGGGAGGGTGGTCAAGAGAGAGAGAGACTTAAGCAGTGAAGATGTAGAGGCAGAGAGAGTTTCTTCAAGAGTGAGTGACGAAGATGAAGATGCTAGTAATGCAAGAAAGAAGCTTCGACTGACCAAAGAACAGTCTGCCTTATTAGAGGAAAGCTTCAAACAGCACAGCACTCTCAACCCTAAGCAAAAACAAGCTTTGGCCAGACAATTGAACCTTCGGTCTCGACAAGTTGAAGTATGGTTTCAGAATAGGAGAGCAAGGACCAAGTTGAAGCAAACGGAGGTGGATTGTGAGTTGTTGAAGAAATGCTGTGAAACACTGACAGATGAAAATAGGAGGCTGCAGAAGGAGTTGCGAGAATTGAAGATACTCAAACTAACTCAACCATGTTACATGCCTATGTCAGCTGCAACTCTCACTATGTGTCCTTCTTGTGAGAGAAACGGCGGAGTTCACGGCGGTGCTGCCAAGACACCATTCTCTATTGCTACAAAGCCTCACTTCTTTAATCCATTTACCAACTCGTCCGCGGCTTGTTAG 849 0.4511 MGFDDPCKLALGLGGLATSADGLVSSAKIYSHNRTSDLNKCSFSFAATGAGVEPSLKLSLSGESYPVVSRKIDVSVNKGGEEFFEMNRQGSPHSSTAVSSFSSGRVVKRERDLSSEDVEAERVSSRVSDEDEDASNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRSRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTDENRRLQKELRELKILKLTQPCYMPMSAATLTMCPSCERNGGVHGGAAKTPFSIATKPHFFNPFTNSSAAC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01679 282 Pfam Homeodomain 138 192 IPR001356 GO:0003677
Pte15g01679 282 ProSiteProfiles 'Homeobox' domain profile. 134 194 IPR001356 GO:0003677
Pte15g01679 282 CDD homeodomain 138 195 IPR001356 GO:0003677
Pte15g01679 282 Pfam Homeobox associated leucine zipper 194 225 IPR003106 GO:0006355|GO:0043565
Pte15g01679 282 SMART HOX_1 136 198 IPR001356 GO:0003677
Pte15g01679 282 FunFam Homeobox-leucine zipper protein 18 123 199 - -
Pte15g01679 282 Coils Coil 200 230 - -
Pte15g01679 282 SUPERFAMILY Homeodomain-like 127 195 IPR009057 -
Pte15g01679 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 54 263 - -
Pte15g01679 282 MobiDBLite consensus disorder prediction 112 139 - -
Pte15g01679 282 Gene3D - 130 199 - -
Pte15g01679 282 SMART halz 194 237 IPR003106 GO:0006355|GO:0043565
Pte15g01679 282 ProSitePatterns 'Homeobox' domain signature. 169 192 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01679 Pte-Chr15 17095726 17097369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01679 1 283 Homeobox Transcription Factor Family AT4G37790 58.140 1.05e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g01679 Homeodomain 2.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01679 K09338 - tcc:18611354 355.14