Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01641 ATGGAATCGTTAGTCAAAACTTTACTTGGAAAAGAACTACTAGATTTGTGTGAGGATGACTTTGAAGGATCAAATGATGAACTCCAAATTTGTAGAGAGGTGTTTTTCAGTCAAAACACCATTCAAATTAGCAAGAAGTGTGATGTTACTGGACTCATTAACTTTAGATGTGAACGTAGTAAGGTTCCGGATACATCAGCTTGCTCTAACAGTGAAAATTCAGTTATGACATGTGACTTTTCCTCAAAAATTGCCGGTAACTCTGCTACTGGGTGTTTCCCGGAGAAGTTCATCTACGAGGACAGGAACGATTACAATCTGAATGCAAAACGATTGAAATATTCACTGCTTGAACTTCCTGATATTAGATCTAATCGCAAAGAAGTTGGAAACACTTTGCCAGTTTCAAGAGAACCTATACCTGATATATCACATTCTCCTGCAGATGCTGGGAAGGAAATTAACTTTTTGGTGGTTGAATCCTCTAACCATGGTGTATCATCTAGTTGCTATCTGTTGAAGGATGACATTTTAGCTTCTGTCAATACAGTGCATGCTCCAACTTGTAAATTAACTAGTATAGAAGCAAATTCTGTGAAGGAACCAAGCAAAATGGTTGCTTCTCCTGCTTCACAGGAAAGCTTTGCCAACAGGCTTTTAGCTGCAACCAGTTCACCAGCTAATGTCCCATATAAATCTGAAGATCCATTACTTACAGTGGAGACAATAAAGGAACTCCAGGCTTTAGATTTAGATATACAAAATAAAGCATTGGTGCCCGATTCCAGGAAGGATACCCGCTCTTTGCTGCAGTACTGTGCTGTGCAATTACTTCTTCAGACAGGATGGTCTATTGAGAGGCGTAAAAGACCCAGCAGGCGCTACATGGAATCAGTTTATATGACCCCAGAGGGACGGGCAGTTAGGGAATTTCCAAAAGCATGGAGGTTATGTGGGGAACTTTTGGCTGCTTATACTTGTGATTCTCTAATGGAAGATGATAACAAGGAATGGTCTAACATCAGTCAGTTCTTATCTGATTTATCTAGTACGATGAAAAATGTTGGGGAATGTATGAATCAACCAGAGAATACAACTACTACTGCTTTGGCTCATCGATGGAGGGTTTTGGATCCCTTTGTGATAGTAGTTTTTGTTGATAGAAAGATTGGTGCCTTGAAAAAGGGTGAGCTTGTCAAAGCAACTCGGAGTCTACTCAGTGGTAAGAAGAATAAGACTGGTTTATCTTCATGTTTGAAGTTAGGTCATTCTGGAGCTCAACTGAATAAAAAACATACCTCCCACCTTCTTGCTGATTCACCAGTTGGTGCTGAAAGCGTTGTGACTGTCTCTGAAGGGAACGATCTTGCCTACAGTCTTGAACCTAGTGTTGGACATATCTCAGCTTGCCATGAACAGTTAGGTAGCATGGGAGAAAAACATACTGATGGTGCACCTGCAGCTATGACTGATAGAGATGATCTATACTTGCTGGATAATGCCAATAGCAATGTGAACCAAGTTAGGGACTCTGGTGAAAAAGGAAACAGCATCCAATTTTTTCACTCTTGCATAGGGCCTGAAGGTTACCTTCAAGATAGGAATATGAAATCCCAAAGCTCTAGTAGAATGATGTCTGAACAAAGTCAGGAAATGTATGGGAAATCTGTACCAGATGTAAAGTTGAATGGTTTGGACAAGGCTTCAAGTTTTGCACATGATGACTTTGTTCATTCACTTGATCCAGAGGCAGTACATGATGAAGAAAAGCATGGGGAGCGATCTGAATTTTCTATGACTGAGAATAGGAGTACACATGCTAGAGAAGAAAGCATTTTGAGAAAGAAGACAAAAAGGAAGTCTAAGAAGATATCAGAAATCAGACTGGCCAATTTAGATCAAAGTGAAATACTAGGTGATAAGGACAAAATGCAGAATGGCAATGATAGCGGTCCCCTATTAGACTTGGAGAAGGTGCACAAATCCATGGATGATGGGGCCACATTGGATGAAGACCATAAAATTTCGTCACCTATTATTTCAGCCCAGCAGTGGATTTCAGAAGATAACATTGAAGCAAAAAAGATTGACCGCAACCATAGTAATTCCAGAACTTGGAAAAGGAAATCTAGTGAATGTCTGATTGAAGATGATGATCTATTAGTTTCGGCATTTATTAGAAATAAAGATCCTGGTATCCACAAAAATACCTCCAGAGTGAAATCTTACAAACTGAAAGCTCAGAGAAAGCTAAAAAGCCAGAGGGGCAGGTGCAGATTGCTTCCAAGGTGCCTTGGTAATGGAGGGAAGCATTTTAAGAATGGTAAATCAAACGGTATGGGAACAAGAACTGTGTTATCCTGGTTAATTGATGCTGGGGTCATAGCATTGGGTGATATGATCCACTATCGAAATACCAGAGGTGATAAAATTGTTAAAGATGGCTTAGTTACCAGAGATGGGATTCTTTGCAAGTGTTGCAGTAACATTCTTACAATTTCTGAATTCAAGATTCATGCTGGGTTTAAGTTAAATCGTCCTTGCTTAAACATTTTCATGGAATCTGGCGAGTCCTTTACATTGTGCCAGCTTCGAGCTTGGTCAGCTGAATACAAAGCTAGGAAAAGTAGGAATCAAGCTGTGCAGTCTGACGAAAATGATCAAAATGATGATTCTTGCGGACTGTGTGGTGATGGAGGTGAGTTAATTTGCTGTGATAACTGCCCTTCTACGTACCACCTCGCTTGTTTGTCTTGTCAGGAGATCCCTGAGGGCAGCTGGTATTGTTCAAACTGCACCTGTCAGATATGTGGAACTTTGGTGAAAGCTAAAGAGGTTTCAAATCCGTCTGATGCATTACAATGTTCACAATGTGAACAGAAATATCATGAGACTTGCCTGCAAGGAAAAGGCATGCAGGAGGAAGCAACAGCAGACACCTGGTTTTGCAGTCATTGTTGTCACCAGGTGTATTCTGGTCTTCAATCTCATGTTGGAGTTATTAACTATATTGCCGAAGGCTTATCGTGGATGCTTCTCAGATGCATTCATGATGATCAGAAGGTTCACTCTGCCCAACGATTTGCATTGAAGGCAGAATGTAATTCAAGATTGGCTGTTGCTCTTTCTATCATGGAGGAATGCTTTTTGTCCATGGTAGATCCAAGAACAGGCATAGACATGATACCCCATCTTTTGTATAATTGGGGGTCCGAATTTGCACGTCTGAATTTTCATGGTTTTTACTCCGTGGTCTTGGAGAAAGATGATGTGATAATCTCTGTAGCATCTATTCGGGTGCATGGAGCTACCCTTGCTGAAATGCCACTAATTGCAACAAACAGTCAGTTCCGTCGTCAGGGAATGTGTCGGCTGCTTGTGGGTGCTATCGAAGAGATGCTCACATCTTTCAAGGTGGAAAAGCTTGTAGTCGCAGCAATTCCAGATCTGGTGGAGACATGGACAAAAGGTTTTGGATTTACACCTGTAGATGATGATGAAAAGAAGAGCTTGAAAAAGCTCAATCTGATGGTGTTTCCTGGAACAATCTTGCTCAGGAAACAGTTGTATGACAACAAAACAGATGACAGACTATCAGGGCCGTATGATTCACAGACCACAAGAATAGACACAACAAATTCTATACAAGAAGAGGACATGGTTGAACCTTTACAACAATGCACTAAAGATGGAGCTGCAAATGAAACTAATGCCAACTCAGATACTAAACCTGCTGAATTCCTGAGCTTTGTGGACCTTGAAGCGGAGAACAAAATGAAAATTGACAAAGTGACATCCGCAGTTAAGATGCTATCGGTGAGTGAAGCTCCACTAAATTAA 3840 0.4078 MESLVKTLLGKELLDLCEDDFEGSNDELQICREVFFSQNTIQISKKCDVTGLINFRCERSKVPDTSACSNSENSVMTCDFSSKIAGNSATGCFPEKFIYEDRNDYNLNAKRLKYSLLELPDIRSNRKEVGNTLPVSREPIPDISHSPADAGKEINFLVVESSNHGVSSSCYLLKDDILASVNTVHAPTCKLTSIEANSVKEPSKMVASPASQESFANRLLAATSSPANVPYKSEDPLLTVETIKELQALDLDIQNKALVPDSRKDTRSLLQYCAVQLLLQTGWSIERRKRPSRRYMESVYMTPEGRAVREFPKAWRLCGELLAAYTCDSLMEDDNKEWSNISQFLSDLSSTMKNVGECMNQPENTTTTALAHRWRVLDPFVIVVFVDRKIGALKKGELVKATRSLLSGKKNKTGLSSCLKLGHSGAQLNKKHTSHLLADSPVGAESVVTVSEGNDLAYSLEPSVGHISACHEQLGSMGEKHTDGAPAAMTDRDDLYLLDNANSNVNQVRDSGEKGNSIQFFHSCIGPEGYLQDRNMKSQSSSRMMSEQSQEMYGKSVPDVKLNGLDKASSFAHDDFVHSLDPEAVHDEEKHGERSEFSMTENRSTHAREESILRKKTKRKSKKISEIRLANLDQSEILGDKDKMQNGNDSGPLLDLEKVHKSMDDGATLDEDHKISSPIISAQQWISEDNIEAKKIDRNHSNSRTWKRKSSECLIEDDDLLVSAFIRNKDPGIHKNTSRVKSYKLKAQRKLKSQRGRCRLLPRCLGNGGKHFKNGKSNGMGTRTVLSWLIDAGVIALGDMIHYRNTRGDKIVKDGLVTRDGILCKCCSNILTISEFKIHAGFKLNRPCLNIFMESGESFTLCQLRAWSAEYKARKSRNQAVQSDENDQNDDSCGLCGDGGELICCDNCPSTYHLACLSCQEIPEGSWYCSNCTCQICGTLVKAKEVSNPSDALQCSQCEQKYHETCLQGKGMQEEATADTWFCSHCCHQVYSGLQSHVGVINYIAEGLSWMLLRCIHDDQKVHSAQRFALKAECNSRLAVALSIMEECFLSMVDPRTGIDMIPHLLYNWGSEFARLNFHGFYSVVLEKDDVIISVASIRVHGATLAEMPLIATNSQFRRQGMCRLLVGAIEEMLTSFKVEKLVVAAIPDLVETWTKGFGFTPVDDDEKKSLKKLNLMVFPGTILLRKQLYDNKTDDRLSGPYDSQTTRIDTTNSIQEEDMVEPLQQCTKDGAANETNANSDTKPAEFLSFVDLEAENKMKIDKVTSAVKMLSVSEAPLN* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01641 1279 Pfam Tify domain binding domain 815 864 IPR032308 -
Pte15g01641 1279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 867 934 IPR013083 -
Pte15g01641 1279 Gene3D - 1061 1178 - -
Pte15g01641 1279 ProSiteProfiles Zinc finger PHD-type profile. 890 935 IPR019787 -
Pte15g01641 1279 ProSiteProfiles Zinc finger PHD-type profile. 931 989 IPR019787 -
Pte15g01641 1279 SMART PHD_3 934 987 IPR001965 -
Pte15g01641 1279 SMART PHD_3 892 933 IPR001965 -
Pte15g01641 1279 CDD PHD_SF 933 986 - -
Pte15g01641 1279 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1026 1190 IPR000182 GO:0016747
Pte15g01641 1279 SUPERFAMILY FYVE/PHD zinc finger 933 988 IPR011011 -
Pte15g01641 1279 MobiDBLite consensus disorder prediction 587 614 - -
Pte15g01641 1279 PANTHER PHD FINGER FAMILY PROTEIN 6 1247 - -
Pte15g01641 1279 SUPERFAMILY FYVE/PHD zinc finger 875 933 IPR011011 -
Pte15g01641 1279 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1079 1165 IPR016181 -
Pte15g01641 1279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 935 991 IPR013083 -
Pte15g01641 1279 MobiDBLite consensus disorder prediction 587 619 - -
Pte15g01641 1279 CDD PHD2_CHD_II 892 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01641 Pte-Chr15 14504219 14515646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01641 8 461 PHD Transcription Factor Family AT3G14980 33.045 8.27e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01641 - - qsu:112033467 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01641 15 14504219 14515646 Pte15g01641 15 14504219 14515646 RCT