Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01640 ATGTCGCATTCTGGCAAACCTGATTCTGTGGTAGGGTTGGATGGTTTGAACGATCGGTTCAGGGACTCATTGAGCTGTGAAGTGAATAAGCCAGATTTTAGAGAGTTCGATTTGGGTTCGCCAGTTTCGCCTTTGAGGACCCAACAGAGTGGACCGGCTGCTAGTGGATTAACTACTACTACCACCAGTAGTAGTTCTAGTTCTTCTGGATCAGTATCATGGCGAAATGGATATAACCCAGTTTCCAGAAAATCGGATTCAGGTCACAAAAACCACTCCGGTGAGCTTTCTGGGTCTAGTGAGAACAGTCCCAGAGCTTCCGAGAGCGTCCGATCCGTGGGAACCGTCAGGAACTTAAAAACGGGTAACACGAGATCCGACTCTGGGACTACGCAGCCGATAATTTATCCGGGTCAAAGCTCAGTCAATTCGCCGACGGTGAATGTGCTACCGACTGGGAACATTTGTCCATCCGGGAAGATTTTGAAGACAGGAATGGCGGCGAATCGAAGCTCCAGAACCGATGTTTTGGGCTCTGGGTCTGTCAACTACGGGCATGGAAGCATAATGCGAGGTGGTGTAGCAGCCAAAAGTGGTGGAGCAGATAACACTGGATTAATAAATATGAAATCTAGCGGCAGCGGTTTTGGTGTCGATGATACAAAGAAAAGGGCAATGCTGAATGTGGATCCTGAGGAGTTGAAGAGAGCTGGGAATGAGCAATACAAAAGGGGTAATTTTTTTGAGGCATTGAATCTGTATGATAAGGCAATAGCCTTATCTCCAGCCAATGCCGCTCTTCGGAGTAACCGTGCGGCAACATTGACAAAGTTAGGACGCTTACGTGAGGCAGTGAGGGAATGTGAAGAGGCCGTGCGGTTGGATCCTCACTATGGAAGGGCACATCAGCGTTTAGGTTCTCTTCTTCTTCGCTTAGGACAAGTGGAGAATGCCAGGATACATCTTTTTTATCCCGGTTCGCAGCCAGATCCAGTTGAAATGCAGAAGTTACAACTATTGGAGAAGCATTTGAGTAGATGTACAGATGCCCGGAGGATAAGCGACTGGAGAAATGTTCTCAGGGAAGTAGATGCTACCATTTCTGCCGGAGCATATTCTTCTCCTGAGCTCTTTATGTGTAGAGCAGAAGCCCTTTTAAAGCTGAACCAAATTAATGATGCTGAAGCAAGTGTATCAAACATCCCCAAGTTGGAACCATATGCAAATTCGTTTTCTCAGGCAAGATTTTTTGGAATACTGTCTGAAGCTTATACCTTCTTTGTCCGTGCTCAGATAGAGATGGCTTTGGGACGGTTTGAGAATGCAGTCACTGCTGCGGAGAAAGCTGCAGATATTGATCCCCGAAATGTTGAAGTTGCCATGATGCTTAAAAATGTAAGGTTGGTGGCAAGAGCTCGCACAAGAGGCAATGATCTTTTTAAATCTGAAAGGTTCACGGAAGCTTGCTCGGCATATGGTGAAGGTCTGAGGTTTGATCCCTCAAATTCGGTTCTATATTGCAACAGAGCAGCATGTTGGTTTAAGCTAGGACATTGGCAAGAGTCAATTGAAGATTCCAATCAAGCGTTACGTATACAACCCAATTACACAAAAGCACTTCTTAGAAGGGCTGCCTCTAACAGTAAGCTAGAAAAGTGGGCTGAAGCAGTCAGTGATTATGAGGCCTTGAGAAGAGAACTTCCAGATGACAATGAAGTTGCTGAGGCTTTGTTCCATGCCCAGGTTGCATTGAAAAAATCTCGTGGAGAAGAAGTTTACAATATGAAGTTCGGCGGTGATGTGGAAGAAATATCTGGGATTGATCAATTTAGAGCTGCAATATCATCACAAGGAGTCTCGGTTGTTAATTTTGGAGCTGCCTCTAACTCACAGTGCAAGCAAATATCACCATTTGTGGATATTTTATGCAGCCGTTATCCATCCATAAACTTCTTGAAGGTGGACATTGAGGAGAGCCCAGCTGTTGCCAGTGCAGAGAATGTGAGGGTCGTACCAACATTCAAAATTTACAAAAATGGGAAAAGGGTGAAGGAAATCATATGCCCTAGTCGTGATGTGTTGGAATATTCAGTGAGGCATTACAGCTTTTGA 2112 0.4522 MSHSGKPDSVVGLDGLNDRFRDSLSCEVNKPDFREFDLGSPVSPLRTQQSGPAASGLTTTTTSSSSSSSGSVSWRNGYNPVSRKSDSGHKNHSGELSGSSENSPRASESVRSVGTVRNLKTGNTRSDSGTTQPIIYPGQSSVNSPTVNVLPTGNICPSGKILKTGMAANRSSRTDVLGSGSVNYGHGSIMRGGVAAKSGGADNTGLINMKSSGSGFGVDDTKKRAMLNVDPEELKRAGNEQYKRGNFFEALNLYDKAIALSPANAALRSNRAATLTKLGRLREAVRECEEAVRLDPHYGRAHQRLGSLLLRLGQVENARIHLFYPGSQPDPVEMQKLQLLEKHLSRCTDARRISDWRNVLREVDATISAGAYSSPELFMCRAEALLKLNQINDAEASVSNIPKLEPYANSFSQARFFGILSEAYTFFVRAQIEMALGRFENAVTAAEKAADIDPRNVEVAMMLKNVRLVARARTRGNDLFKSERFTEACSAYGEGLRFDPSNSVLYCNRAACWFKLGHWQESIEDSNQALRIQPNYTKALLRRAASNSKLEKWAEAVSDYEALRRELPDDNEVAEALFHAQVALKKSRGEEVYNMKFGGDVEEISGIDQFRAAISSQGVSVVNFGAASNSQCKQISPFVDILCSRYPSINFLKVDIEESPAVASAENVRVVPTFKIYKNGKRVKEIICPSRDVLEYSVRHYSF* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01640 703 MobiDBLite consensus disorder prediction 32 141 - -
Pte15g01640 703 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01640 703 ProSiteProfiles TPR repeat profile. 423 456 IPR019734 GO:0005515
Pte15g01640 703 Gene3D Tetratricopeptide repeat domain 229 589 IPR011990 GO:0005515
Pte15g01640 703 Pfam Tetratricopeptide repeat 426 456 IPR019734 GO:0005515
Pte15g01640 703 Pfam Thioredoxin 608 688 IPR013766 -
Pte15g01640 703 FunFam TPR repeat-containing thioredoxin TTL4 595 702 - -
Pte15g01640 703 SUPERFAMILY TPR-like 230 577 IPR011990 GO:0005515
Pte15g01640 703 ProSiteProfiles TPR repeat profile. 503 536 IPR019734 GO:0005515
Pte15g01640 703 MobiDBLite consensus disorder prediction 92 141 - -
Pte15g01640 703 Pfam TPR repeat 238 279 - -
Pte15g01640 703 CDD TRX_family 608 695 - -
Pte15g01640 703 MobiDBLite consensus disorder prediction 42 84 - -
Pte15g01640 703 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 21 700 IPR044534 -
Pte15g01640 703 SUPERFAMILY Thioredoxin-like 506 701 IPR036249 -
Pte15g01640 703 ProSiteProfiles TPR repeat profile. 265 298 IPR019734 GO:0005515
Pte15g01640 703 ProSiteProfiles TPR repeat profile. 231 264 IPR019734 GO:0005515
Pte15g01640 703 Gene3D Glutaredoxin 595 702 - -
Pte15g01640 703 SMART tpr_5 503 536 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 469 502 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 537 570 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 231 264 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 265 298 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 375 408 IPR019734 GO:0005515
Pte15g01640 703 SMART tpr_5 423 456 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01640 Pte-Chr15 14491623 14495777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01640 468 539 U-box Gene Family AT3G07370 34.722 5.44e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01640 - - qsa:O6P43_029173 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01640 15 14491623 14495777 Pte15g01640 15 14491623 14495777 RCT