Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01616 ATGGCGCTACTCTCTGTTGCAACTTCCTTCCATTCTTGTGCTTCGTCCAAATCGTCATTTTCTTGTCAGAAAAGCCCCAACTCTAAAGCCCCATTTGTTGGTTTCCAGCTTTCATCCTCAAAGTTTCGTATGCATACACTTTCTTCTTCCAATTCCAAACGAAAACTTCAGGTTCGTTGCCAAGACCTTTCTATGGTTCCTGTGGAGCAACGTTGGATGTTCGAGGACTCTGAAGCTGGCGGCCCTGACATTTGGAACAAAACCTGGTACCCGAAAGCTGCAGATCATGTGAACACAGACAAGACATGGTATGTTGTCGATGCCACAGATAAAATTCTTGGAAGACTAGCATCAACTATTGCTATTCACATCCGTGGAAAAAATCTTCCAACCTATACCCCTAGCGTGGATATGGGAGCATTTGTAATTGTGGTAAATGCAGAAAAAGTTGCAGTGTCCGGAAAAAAGAGAAATCAGAAGCTTTACAGGAGACATTCAGGACGACCTGGTGGTATGAAAGTGGAAACATTTGCACAGTTGCAGCAAAGGATTCCAGAAAGAATCATTGAGCACGCTGTTCGTGGTATGCTTCCGAAAGGGAGGCTCGGTAGGAGATTGTTCACTCACTTGAAGGTTTATGCGGGCCCCACTCATCCACATGAAGCCCAGCAACCCATTGAGCTGCCCATAAGAGACAAGAGAATACAGAAGGAAGCATAG 720 0.4514 MALLSVATSFHSCASSKSSFSCQKSPNSKAPFVGFQLSSSKFRMHTLSSSNSKRKLQVRCQDLSMVPVEQRWMFEDSEAGGPDIWNKTWYPKAADHVNTDKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMKVETFAQLQQRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYAGPTHPHEAQQPIELPIRDKRIQKEA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01616 239 NCBIfam 50S ribosomal protein L13 97 228 IPR005823 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 CDD Ribosomal_L13 103 216 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 FunFam 50S ribosomal protein L13 86 230 - -
Pte15g01616 239 Gene3D Ribosomal protein L13 92 235 IPR036899 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 SUPERFAMILY Ribosomal protein L13 97 231 IPR036899 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 ProSitePatterns Ribosomal protein L13 signature. 193 215 IPR023563 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 Hamap 50S ribosomal protein L13 [rplM]. 103 229 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 PANTHER RIBOSOMAL PROTEIN L13 89 235 IPR005822 GO:0003735|GO:0005840|GO:0006412
Pte15g01616 239 Pfam Ribosomal protein L13 101 219 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01616 105 229 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 30.303 2.41e-06 45.1