LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte15g01607	ATGGGTTCTGGCATAATGCGGCGAGAAGATTACTCACTACTGAAAGACTTCAAATTCGAGGTTGAAGCAAAGGATGAAACTTTTACACTCTGCTTCTGGCTTTATCTAATGCGTTCCAGTAAATTCCCTACTACAATTCTACATCAGGTCCATTCAGATACTCACTGCAGTGTTCCTTTCTTTGTTGTTGATGAAAAGAAGAGAATGATGCTTTTACCAATGCTTTGGTTACATGATGAGGCTTCTGACCAGGGAAAATTTTCTTCTTGGATAGACGTGCTGCATGCCACTAGAGATTTTGAATTACATGTTCAGGAATGGATTCATATTGGGTGTGAGGTTACTGCCGGTTATATGCGACTTTATATAAATGGAAAGGTTATTGGAGAGAGGGCTTTGTCTTCCTCTCCAACCAAGGTCTCAAGTTCAAGTTTTTTAAAGAAGATAACTTTGACAGGTATTAATGGAGAGGGCAACAGCATGGAGGCTTATATTCACAATGTGGAAATATTACCATTGGGTTCATCTCTTAAGAATCACCATGGAAAGAATCCACCTATTACTTTGTCGATCGACAAGTCTTCTACATCTGAGATTGAAGAAGACAACGAGGGCATTTGGAGCATCGTTGGCGGTAAGGCATCTTGTCGCAGAATATTTTCTTTGGATGTTGTTTTGTCAAATGTCTTTGGTCAGACGGTAAACAAGGAAACTGAGTGCTGGCAGGTTGTTGCTTCCCTACACTACGCAGACAATGGGACTCCTGTGGAGAATACAACAGAAGCTGAAGCACCCCTTTTGGTTGTTTATGATGGTATTGAATTTCCTTCATCTGAACGACCAATTGCACTTCTACAAGGACGAGCATCATTTAAACTCAAGATATCCCAGCTTTCATCCAAGTGTGATAATAGACTATTCCACATTAAGTTCCACATTCCAAAGTTTGAGGTTTATCCTTTCTTTGAGGCACGGTCCCCTTCAATTCGTTGCATCTCTCGGAGTCGCAATACACGAGTGTCCACTCTGGTGTGGAAAAGAACAACAGCTTCTCTTCCACAAAATGGTTCATCGCAATCTTTAATTGTGAACGATGGTTCTGAAGCTCAGGAGGAACCTATGCACGAAACAAAATCTAATCCCTCATTAAAGAGATTTAGACTTGGACATGATAAAATTGCTGTACAAATGAAGGCCACACCTAGACTGGAGCCATTTGATGAGGAATGTAATTCTCATGCGTGGATCACTGATCAGGTTGAAAATGGGCTTGCTATAAGCTCCAAGGACAGACCTGAGAAATTTGATGAAGCAGATAACTCCCCTGAGTCAGAGAGTATAGGGGATTGGCGTTCAAATTCCAAGAGTATGTGCCATAAACACAATCCTGTCTCAGATATGACCATTTTCAAATACTGCCTGGCAGGCTTCAGTGAGAGGTCTCTAATGCTAAAGGAAATTGTCACTTCAGCTTCTGAGTCAGAAATTCTGGAATTGGCACGTCAAGTGTCACTTTATTCTGGATGTTCACATCACTGGAATCAAATCATTATTGCAAAGAAGTTAGTTGAAGAAGGTACGAAAGCTTGGAGTAGTATATCTCAAAACAGTAATCAGGTGCAGTGGGAGAATGCAGTTCTGGAGATTCAAGCGCAATTCATGAAAAATTCTGGCTGCAGTTCTAGAAAACTTGCAAAACAGGACTTTGAGCTTTTGAGGAGAATTGCTGGATGCCAGGACTTCATGGACCAAGAAAACTTCGAAAAGATGTGGTGCTGGTTGTACCCTGTAGCTTCCACAATCTCAAGAGACTGCCTAAAAACAATCTGGAGCTCTACATCACCTAAATGGATAGAAGGGTTCATAACTAAGGAAGAAGCAGAGTCTTCACTTCAAGGTGCTTGGGGTCTTCAAGAACCCGGGACATTTTTCCTTCGATTCCCCACGTCACGGAGCTGGCCGCATCCCGATGCCGGTACTCTAATTGTAACTTATGTTGGCAGTGACTATAATATTCATCACAGGTTGCTGGCAATTGATCGCCTATATGTGTCTGGTGAAAAAGCAATTGACGCAAAGGCATTCCAAGATATGTTACTGGCAGAACCAGAGTTGTCTCGATTAGGAAGGATAATAAGAAGTCATTAA	2148	0.4167	MGSGIMRREDYSLLKDFKFEVEAKDETFTLCFWLYLMRSSKFPTTILHQVHSDTHCSVPFFVVDEKKRMMLLPMLWLHDEASDQGKFSSWIDVLHATRDFELHVQEWIHIGCEVTAGYMRLYINGKVIGERALSSSPTKVSSSSFLKKITLTGINGEGNSMEAYIHNVEILPLGSSLKNHHGKNPPITLSIDKSSTSEIEEDNEGIWSIVGGKASCRRIFSLDVVLSNVFGQTVNKETECWQVVASLHYADNGTPVENTTEAEAPLLVVYDGIEFPSSERPIALLQGRASFKLKISQLSSKCDNRLFHIKFHIPKFEVYPFFEARSPSIRCISRSRNTRVSTLVWKRTTASLPQNGSSQSLIVNDGSEAQEEPMHETKSNPSLKRFRLGHDKIAVQMKATPRLEPFDEECNSHAWITDQVENGLAISSKDRPEKFDEADNSPESESIGDWRSNSKSMCHKHNPVSDMTIFKYCLAGFSERSLMLKEIVTSASESEILELARQVSLYSGCSHHWNQIIIAKKLVEEGTKAWSSISQNSNQVQWENAVLEIQAQFMKNSGCSSRKLAKQDFELLRRIAGCQDFMDQENFEKMWCWLYPVASTISRDCLKTIWSSTSPKWIEGFITKEEAESSLQGAWGLQEPGTFFLRFPTSRSWPHPDAGTLIVTYVGSDYNIHHRLLAIDRLYVSGEKAIDAKAFQDMLLAEPELSRLGRIIRSH*	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte15g01607	715	SUPERFAMILY	SH2 domain	611	679	IPR036860	-
	Pte15g01607	715	Gene3D	SH2 domain	603	710	IPR036860	-
	Pte15g01607	715	Gene3D	-	9	171	-	-
	Pte15g01607	715	MobiDBLite	consensus disorder prediction	427	441	-	-
	Pte15g01607	715	MobiDBLite	consensus disorder prediction	426	454	-	-
	Pte15g01607	715	Pfam	Concanavalin A-like lectin/glucanases superfamily	24	170	-	-
	Pte15g01607	715	SUPERFAMILY	Concanavalin A-like lectins/glucanases	25	144	IPR013320	-
	Pte15g01607	715	ProSiteProfiles	Src homology 2 (SH2) domain profile.	617	715	IPR000980	-
	Pte15g01607	715	PANTHER	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	10	706	IPR001217	GO:0003700\|GO:0006355\|GO:0007165

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	STAT	Pte15g01607		Laminin_G_3	2.5e-06	CL0004

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte15g01607	-		-	qsa:O6P43_001113	954.896