Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01581 ATGAGTAACATGAGCAGCATAAGCATGTTGGAGTCCAAACTCCCACCTGGGTTTAGGTTCCACCCCAGAGATGAGGAGCTTGTATGTGACTACTTGATGAGAAAGGTCACACACTCCGACTCTCCTCTTATGGTCGATGTTGATCTCAACAAGTGCGAACCATGGGACATCCCTGAAACAGCATGTGTGGGAGGGAAGGAATGGTATTTTTATACACAGAGGGATCGGAAATATGCAACTGGACTGAGAACAAATCGTGCCACTGCATGTGGGTATTGGAAGGCTACAGGGAAGGATAGAGCTATTGTTCGCAAGGGCAAATTATTAGTTGGTATGAGAAAAACTTTGGTTTTCTATCAAGGAAGGGCTCCTAAAGGAAGAAAGACTGAGTGGGTGATGCATGAGTTTAGGCTTGAGGGTTCCCTTGCCCCTCCCAATAATCCCTCTACCAAGGAAGATTGGGTTTTGTGTAGAGTGTTTTATAAAAGCAAGGAAGCTGTTGCTGCGAACAAACCTAGCATGGGAAGCTGCTACGATGACACTAGCTCCTCAAATCTCCCACCATTAATGGACTCTTACATCAGTTTTGACCAAACTCGTACCCATATAGATAACTACGATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCACAACCAAATTACCGACCCAACTTTTTTCAGTCACATGGAACCAAATTTATTACCTACCAAGCAAGCAAGATCGACGTCGACGACAATGGGCGGAATACCCAACTTGACTTCTTACTCAGACCCTAACAACAGTATTTCATATGACAGTAAGGTAATCGAAGCTGTATTGAATCAGCTAACAAAGATGGAGTCAAACTCAAAAGAGTCTCCAAGCTTGGGAGAAGGAAGTTCAGAGAGTTACTTAACTGAAGTAGGTATGCCCAACTTATGGAACAATTATTCATCATGA 942 0.4374 MSNMSSISMLESKLPPGFRFHPRDEELVCDYLMRKVTHSDSPLMVDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATACGYWKATGKDRAIVRKGKLLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGSLAPPNNPSTKEDWVLCRVFYKSKEAVAANKPSMGSCYDDTSSSNLPPLMDSYISFDQTRTHIDNYDEQVPCFSIFSHNQITDPTFFSHMEPNLLPTKQARSTSTTMGGIPNLTSYSDPNNSISYDSKVIEAVLNQLTKMESNSKESPSLGEGSSESYLTEVGMPNLWNNYSS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01581 313 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 241 - -
Pte15g01581 313 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Pte15g01581 313 FunFam NAC domain-containing protein 100-like 23 166 - -
Pte15g01581 313 SUPERFAMILY NAC domain 2 162 IPR036093 GO:0003677|GO:0006355
Pte15g01581 313 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Pte15g01581 313 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01581 Pte-Chr15 13412570 13417160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01581 5 309 NAC Transcription Factor Family AT1G56010 59.248 2.67e-126 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01581 NAM 6.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01581 - - qsa:O6P43_029315 447.973